Salvia splendens (scarlet sage): 121767650
Help
Entry
121767650 CDS
T07627
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sspl04812
]
121767650
Cytoskeleton proteins [BR:
sspl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
121767650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_DCAF12
VPS8_N
PROPPIN
PAN2_N
Motif
Other DBs
NCBI-GeneID:
121767650
NCBI-ProteinID:
XP_042019911
LinkDB
All DBs
Position
15:complement(11768707..11780781)
Genome browser
AA seq
842 aa
AA seq
DB search
MWRWAGVYLLRSAALSPNCARVFALFDFHFWSWEMTTTTKRAYKLQEFVAHSSSVNCLKI
GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSGIDSVSFDSSEILVAAGAASGTIK
LWDLEEAKIIRTLTGHRSNCISLDFHPFGEFFASGSLDTNLKIWDIRRKGCIHTYKGHTR
GVNTIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQVQSIDFHPHEFLLATGS
ADRTVKFWDLETFELICSTAPETTGVRSMIFNPDGKTLLCGLHENLKVFSWEPIRSHDTV
DVGWSKLSDMNIHEGKLLGCSYNQSCVGVWVVDISRIEPYAIGKTARLTDDNDAKSNSGG
SSVTTEDNVKANLGRLSISNNADAVKETRSLTRLSVPQNSDKDSKSSASTPSTPQKSNIS
VVSKTMQASAPSISCSINPKRQAPKAQSVANVLFNRSDVIPVIVPRNNPRAEQVTEFRKE
DAPVKAVPLHLQPKTSDVSKSINTRDVLERTNIPTQPDNEPPKSMDSNVPDRIFSAPVKN
SMSGLAADRKARDDKHMSSRRVDTNAAIDTLARYQHESYEFRGNSMNVEASHVEGQRGGR
TQLILPNWEQKGRSSYRPGLASSNISGRLNARSYPSTDENESVSASDEDTITDLVQQHDQ
FVGSMMSRLGKLQIVLNYWQRHDIRGALSAISKMGDQSVLADVMSLLAEKTDVVTLDICS
CLLPLLTGLVESNMDRHQDIALDMLIKLVRVFGSVIYSSLSVPASVGVDIEAEQRLERCN
LCYVELEKLKCSLPALSRYVFLMKLLLQVDAKSQLLSAVLFCRRGGNIAKSALELNLALQ
EV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtgggctggcgtttatctcctgagatctgccgcactgtctccgaattgtgct
agggtttttgctctttttgatttccacttttggagttgggaaatgacgaccaccaccaaa
cgagcttacaagctacaggaatttgtagctcattcttcaagtgtgaactgcctaaagatc
gggaggaaatcatcaagggttcttgtgactggaggagaagatcacaaggtcaatctctgg
gctattggcaagcccaatgccatactgagtttgtcaggccattccagtggaattgattca
gttagctttgattcatcggagatattggttgctgctggagcagctagtggtaccattaag
ctctgggatttggaggaggctaagatcatacgtaccctcactggtcaccgctccaattgc
atatccttggactttcatccttttggggagttctttgcatctggttccctggacacaaat
ctcaaaatatgggatataagaaggaaggggtgtatacacacctacaagggtcatactcga
ggagttaacacaatcaggtttactcctgatgggcggtgggttgtttctggtggagaggac
aacactgtgaagctctgggatttaactgctggcaagcttttgcatgatttcaaatgccat
gaaggccaagttcagtccatcgatttccatccacatgagtttttgctggcaacaggctca
gcggacagaactgtaaaattctgggatcttgaaacatttgagctaatttgctcgactgca
cctgagaccaccggagtacgcagtatgatcttcaatcctgatgggaaaaccctgctttgt
ggcttgcatgagaatttgaaagttttctcatgggagccaatcagaagtcatgatactgta
gatgtggggtggtctaaactatcagatatgaatatccatgaaggaaagcttctaggatgt
tcttataatcagagttgtgttggagtttgggttgtagacatttcgcggattgaaccatat
gcaattggaaaaactgctcgattaactgatgataatgatgccaaatcaaattctggtggt
tcatctgtaaccacagaggataatgtgaaggccaatttgggcaggctttctatttcaaat
aatgctgatgcggtgaaggaaactagatctctcacaaggctctctgtcccccaaaattca
gataaggattctaaatcaagtgcatctactccgagcactcctcaaaagtcaaatatcagt
gttgtttcaaagacaatgcaggccagtgcaccatcaatttcctgttcaataaacccaaag
cggcaagcgccaaaggcccaatcagtagcaaatgttttgttcaacagatctgatgtaata
cctgtgatcgtgccacgaaataatcctagagctgagcaagttactgaatttagaaaggaa
gatgctccagttaaagctgtacctttgcatttacagcccaaaacttctgatgttagtaaa
agtattaacaccagagatgttttggagaggactaatattcctactcagcccgataatgag
cccccaaagtccatggattcgaatgtcccagatagaattttcagtgcaccagttaagaac
tcaatgagtggacttgctgcagacagaaaagccagagatgataaacatatgagttcaaga
agagtcgatacaaatgctgctattgatacccttgctagatatcagcatgaaagttatgaa
tttcgaggaaatagtatgaatgtggaggcatctcatgtagaaggtcaaagaggaggtaga
acacagctgattctccctaactgggaacagaaaggaagaagttcttaccgtccaggtctt
gcttcaagcaatatctctgggagattaaatgctagaagttatccttcaactgatgaaaac
gagtcagtctctgctagtgatgaagatactattactgatttggtacagcaacatgatcaa
tttgttggctcaatgatgtctcgattaggcaaactgcagatagtccttaactactggcag
aggcatgatataagaggggctcttagtgcaatcagcaaaatgggtgaccaaagtgtgctt
gctgatgtaatgagcctattggcagaaaaaactgatgttgtcacattagatatttgttca
tgtcttttgccactcctgacgggacttgtggaaagtaatatggacaggcatcaagatatt
gcattggatatgctcataaaattggtgagagtatttggctctgtgatttactcttcactg
tcagtgcctgcatctgttggtgtagacatagaggcagagcaaaggctggagcgttgcaat
ctctgctatgtggaacttgagaaattgaaatgctcccttccagctctttcaaggtatgtt
tttctcatgaaattactgcttcaggttgatgcaaaatcccaacttctgtctgctgttttg
ttttgcagaagaggtggtaatatcgccaaatcagcactggaactgaatctggcacttcag
gaagtttga
DBGET
integrated database retrieval system
