Salvia splendens (scarlet sage): 121767660
Help
Entry
121767660 CDS
T07627
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121767660
03460 Fanconi anemia pathway
121767660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121767660
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121767660
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121767660
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121767660
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
121767660
Bloom's syndrome complex (BTR)
121767660
FA (Fanconi anemia) pathway
121767660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
JIP_LZII
Cob_adeno_trans
bHLH_IRO3
CCDC-167
Motif
Other DBs
NCBI-GeneID:
121767660
NCBI-ProteinID:
XP_042019925
LinkDB
All DBs
Position
15:7162161..7171804
Genome browser
AA seq
1191 aa
AA seq
DB search
MKQNHSSGSNSDGGINCKFNWLEHAKAHNNFSSQDKFLSSKFLYSLSSQRPQVVKATGAR
HLLCQVQNDRMQGQQLEKAWQLLSSLQLSSRSYSKPGKSIPLAKNVNASISGGSRQTTQL
FQSDLKSMAAGRDQNHKSFSSKGDVQVGGPSKSLNSCYTANTVEVKEGRQFPTMQNGSHS
VHHTAIKSTTQASTGNDPRSSFAVDIDDDDILEDIDVDQIVLNHYQSTPQPSLSKIPPIT
PPAVKNNYPNDEINLPPELCLICSHGCKIGLCSEASDHLKTLKDTLIAISNDLIDNVDDM
SPEKVDALRQERQQLKEQIKQLEKHIPNMSVNEERRTSHFSASTAIPMAFHYETPGTVPY
TIGPTRLDSQFQENNSLYDSDRWGSSSCYTTDGIGVSTPYERTPYVPKNIEVNYIDGSND
QKWSSQGFPWMKKLEAENRKAFGNHFFRPNQREVINATMSGHDVFVLMPTGGGKSLTYQL
PAHICAGITLVISPLVSLIQDQIMHLLQANIGAAYLSASMDWAEQQEILRELNSEYCKYK
LLYVTPEKVAKSDVLLRHLENLHAREYLARIVIDEAHCVSQWGHDFRPDYQSLGILKQMF
PTVPVLALTATATISVKEDVVRALGLVDCIVFRQSFNRSNLRYSVVPKTKKCIEDIDKFI
KENHFDECGIIYCLSRMDCEKVAEKLKEYGHRAGFYHGSLEATQRTMIQRQWSKDEINII
CATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQPASCVLYYSYSDYIRVKH
MITQGAYEQTPFASGHGRSNMTSSGKLLETNTENLLRMVSYSENDVDCRRLLQLIHFGEK
FDPINCLKTCDNCSKNHICVEKDVTEIAKQLVELVKITRQQFSTAHLLEVYRGSLSQYVK
KHRHEALSLHGAGKHLAKGEASRVLRHLVIEDILFEEVKKSDVYGSVSSVVKVNDSKARG
IFVGGQTIKLRFPSTAKAFKSSRSEATPAKGSLTSGKQTSQQTENPAQPQPKVDVDLSGK
LFESLRKLRLALVKEGGDGLCAHHVFTNGTLQQIGIKVPRTKEELLEVNGIGKMKLSRYG
DRLLETIEATIREHNKEKSRSSSNDSLDSKRRRDAASIPDGNDDFTESTARTKKRLVKKQ
DKSSQQQQAYQFDLGDIDFDDDLFDVEVDQSTSGRVLPSWSGSTNGSQLHA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaatcattcgagcgggagcaactccgatggaggcatcaattgtaaattcaat
tggcttgagcatgccaaagcacataataacttctcgagccaagataagttcttgagctcg
aaattcctgtactcactgtcaagtcagagacctcaagttgtcaaagcaacgggtgctagg
cacttgctttgtcaagttcagaacgacaggatgcagggtcaacaacttgaaaaggcctgg
cagctgctttctagcctccagttatcttctagaagttatagtaaacctgggaaaagcatt
cctttagcaaagaatgtcaatgcatctatatctggaggttcaagacaaacaacacagcta
ttccaatctgatttgaagagcatggctgcagggcgagatcaaaatcataaaagctttagt
agtaaaggggatgtacaagttggtgggcccagtaaaagcctgaacagttgttatacagcc
aacactgttgaggttaaggaaggtagacagtttccaaccatgcagaatggctcacactct
gtccaccatactgcaattaaatctactacgcaagcaagtacagggaatgaccccaggtct
tcctttgctgttgacatagatgatgatgatattttggaggatattgacgtggaccaaata
gttttaaatcattatcagtcaacacctcaaccatcactctctaaaattccaccaattact
ccacctgcggttaaaaacaattatcctaacgatgaaataaatttacctccagagctgtgc
ttgatatgcagtcacggttgtaagataggtctgtgctctgaagcttcagaccaccttaaa
acgttgaaggataccctgatagctatatcaaatgatctaattgacaatgttgatgatatg
tctcctgagaaagtagatgcccttcgccaggaaaggcagcagctgaaggaacaaattaag
cagcttgagaagcatattccaaacatgtcagtcaacgaggaaagaagaacatcacatttt
tcagcctctacagcaatacctatggcttttcactacgagactcctggcacagtgccgtac
acaattggtcccacaagacttgattcccagttccaagaaaacaattcattatacgactct
gatagatggggttcatcgtcatgctatacaacagatggtataggggtttcaactccatat
gagagaacaccttatgtgcccaagaatattgaagttaattacatagacggttcaaatgac
caaaaatggagcagtcagggatttccttggatgaaaaaactagaggctgaaaacagaaaa
gcatttggtaatcatttctttcggccaaaccaaagagaggtgatcaatgctactatgagt
ggacatgatgtgtttgttcttatgccaactggaggggggaaaagtctgacttaccagctc
cctgcacatatatgcgctggtataactttggtcatttcacctcttgtttctcttatccaa
gaccaaatcatgcatcttttgcaggcaaacataggtgctgcttatctcagtgccagcatg
gactgggctgagcagcaggagattcttagggagcttaattcagaatactgcaaatacaag
ctgctgtatgtcacccctgagaaagtcgcgaaaagtgacgtcctactgcggcatttggag
aacctacatgctcgtgagtatcttgctaggattgtaatcgatgaggctcattgtgttagc
caatggggacatgactttagaccagattaccagagtctgggcattttgaagcagatgttt
ccaactgtacctgtattggccttaaccgctactgctactattagtgtaaaggaagatgtt
gtacgagctcttggtctagtggattgcatcgttttcagacaaagttttaatcgttcgaac
ctgcggtattcggtcgttcccaaaacaaaaaagtgtatagaagacattgacaaatttatc
aaagagaatcatttcgatgagtgtgggatcatttattgtctttctagaatggattgcgaa
aaagtagctgaaaagttaaaggagtatggacacagggcaggattttaccatgggagcctg
gaggctacacagcgtacaatgattcaaagacagtggagtaaggatgagatcaacattata
tgtgcaacagtggcctttggcatgggtatcaataagcctgatgttaggtttgtcattcac
cattctcttccgaaatctattgaaggctaccatcaggagtgtggtcgtgctggtagggat
ggtcagcctgcatcttgtgtgttatactacagctatagtgattatatccgagtgaagcat
atgattactcaaggtgcgtatgagcaaactccctttgcatccggacatggtcgtagcaac
atgacatcctccgggaagttattggagacaaacactgagaatcttctaagaatggttagc
tactccgagaatgatgttgactgtcgacgcctgctacagcttattcattttggagaaaaa
tttgatcctattaactgcctgaaaacatgtgacaattgttccaagaaccacatctgtgtt
gagaaagacgtgactgagatagcaaagcagctggttgaattggtaaagataacaagacag
cagttttcaactgcccatctgttggaagtctacagaggttccttgagccaatatgtcaag
aaacacagacatgaagcactgagcctgcatggagctggaaaacatttggctaaaggtgaa
gcatctcgtgtgttgcgtcatttggtaattgaagatatcctttttgaggaagtgaaaaag
agcgatgtatatggatcagtgtcctcagtggtgaaggtgaatgactccaaggcccgcggt
atctttgttggaggccagacaattaaattaagattcccgtctactgctaaagctttcaag
tcaagtagatcagaagccactccagcgaaaggctcactgacatcaggaaagcaaacctct
caacagacggagaaccccgcccaaccacagccgaaagtggatgtggatctctcaggcaag
ctgtttgaatcgttgcgaaaacttagactagcccttgtgaaggaaggtggagatgggctt
tgtgcacatcatgttttcacaaatggtacattgcagcagatcggcataaaagtacctaga
actaaagaggaacttctagaggtcaatggcatcggcaaaatgaaactgagcagatacgga
gacaggttgctggaaaccattgaagccaccatcagggaacataacaaagagaaaagtaga
agcagcagcaacgacagcctcgactcaaaaaggagaagagatgctgccagtatccctgat
gggaatgatgacttcaccgagagcactgcacggaccaagaaaaggctggtgaagaaacag
gacaaaagctcacagcagcaacaggcataccagtttgatctcggtgacatcgactttgac
gatgatctatttgatgtcgaagtcgatcaaagtaccagtggtagagttctaccttcatgg
tcagggtcaaccaatggaagccaactccatgcttga
DBGET
integrated database retrieval system
