Salvia splendens (scarlet sage): 121767785
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Entry
121767785 CDS
T07627
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121767785
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121767785
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Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
121767785
NCBI-ProteinID:
XP_042020046
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Position
15:19804594..19807712
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AA seq
520 aa
AA seq
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MLRGDSGFYSYAIYEHLENWPDLDIEESRIAFKLDQKMFNYMAISKQKQRMMPTGAERAA
GKVLAYKEAVLITNTTHPILKGQVDDKYQYSCDNKDNHMHGWMGSDPHIGFWVITPSDEV
RVGGPMKTDLTSHAGPIALAIFLSNHYMGPHYGIKLRGGEHWKRVFGPVFIYLNSDSGND
HPTLWKDARNQMLKETKKWPYDFPSSADYPSAKQRGQIYGRLLIYDQYISTHLIKARSAY
VGLAPPGDQGSFQDDSKSYQFWTRSDKNGFFTIEHVRPGTYNLYAWVPRVIGDFKYEDNI
VMNPGSKIDIGDIVYNPPRSGPTLWEIGVPDRTAFEFYVPDPHPGLTNKLYINHVEKYRQ
YGLWDRYTDLYPKNDLIYNINDSDYRKDWFFAHVTRKSGNNKYKPTTWKILFNLTNIDNV
GVYTLRIALACANLANIQAWINELKTSTPHFSTGKIGRDNAIARHGIHGRYWLYGVDIAG
SQLVEGENTIYLKQATGNNPFVGAMYDYIRLEAPSQQDQD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcggagattcagggttctactcatacgcaatatacgaacatttggaaaattgg
ccggaccttgacatagaggaatcaagaatcgcattcaagcttgatcaaaagatgtttaac
tacatggcgatttcgaagcagaagcagaggatgatgcccacaggggctgagagggctgct
ggtaaagttcttgcttataaagaagcagttctcataacaaacaccactcatcccatcctc
aaaggtcaggtggacgacaagtaccaatactcgtgcgacaacaaggacaaccacatgcac
ggatggatgggctccgatccccacatcggattctgggtcataacacctagcgatgaagtt
cgagtgggtggtcccatgaaaaccgaccttacttctcatgccggtcccattgcccttgcc
attttcttaagtaatcattacatgggacctcattacggtattaaattacgcggcggagag
cattggaagagggtttttggccccgttttcatatacctcaactcggattcgggtaatgat
catccaactttgtggaaagatgcaagaaaccagatgttgaaagaaacaaagaaatggccg
tatgatttcccgtcttcggctgactaccctagtgcgaagcaacgaggacaaatctatggt
cgcttgctcatatacgaccagtatattagcactcacctaatcaaagcaagatcagcttat
gtaggattggctccgcccggagatcaaggatcttttcaagatgattctaagagctatcaa
ttttggacacggtcagataaaaatggattctttaccatcgaacatgttcgccccggaact
tataatttgtacgcttgggttcccagagtcatcggggactttaaatatgaagataatatt
gtcatgaatccaggcagtaagattgacataggtgacattgtgtacaatcctccaagaagt
gggcccactctttgggaaatcggtgttcctgatcgaactgctttcgagttctatgtcccg
gatccgcatcctgggcttactaacaagctatacatcaatcacgtcgaaaagtataggcag
tatggcttatgggacagatatacagatctttatcctaaaaacgatctgatttacaacatc
aacgatagtgattatagaaaagactggttctttgcccatgttacaaggaaatcgggcaac
aataaatacaaacctacgacatggaagattctatttaacttaacgaatatcgacaacgtt
ggagtctacacactcaggattgccctagcatgtgccaacttggcgaatatacaagcatgg
atcaacgagctgaagactagcacgccccatttctcaacagggaaaataggccgagacaat
gcaatagcaagacacgggattcatgggaggtattggttgtacggagtggatatagcagga
tctcagcttgtggaaggggaaaacaccatctatcttaagcaagcaacggggaataatcct
tttgttggtgctatgtacgattatattagactcgaagctccctctcaacaagatcaagac
taa
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