Salvia splendens (scarlet sage): 121768076
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Entry
121768076 CDS
T07627
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121768076
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121768076
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
121768076
NCBI-ProteinID:
XP_042020362
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All DBs
Position
15:complement(4298453..4303361)
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AA seq
456 aa
AA seq
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MSTSAQPQFRYTQTPSKVLHLRNLPWECIEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FSDLNQAINMVTYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDIQTASTARDSLDGRSIPRYLL
PSHVNECYLRISYSAHTDLNIKFQSHRSRDYTNPHLPVNPTAMDGLHQPVVGPDGKKKEF
ESNVLLASIENMQYAVTVDVLNTVFSAFGTVQKIAIFEKNGGTQALIQYPDIAIAAVAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPMQQATGWQNPPAAPAVGYTS
GGVQQVHAQAAPSSSWFPTMPAGVQTYISSPSSFPGQAYGAAPPPAYAAAAIPPFSSPNA
HPPPGAPQTGGSVPLHQPNCPPGGSPHPSQSPYYGS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggcgcagccgcagttccggtacacgcagacgccgtcaaaggttctccac
ctccggaatcttccgtgggagtgcatcgaagaggagctcatcgagctctgcaaacccttt
ggcaagattgtcaacaccaagtgcaacgtcggggcaaatcggaaccaagcctttgtcgaa
ttctccgatcttaaccaggccattaatatggttacatactatgcatcgtcttcagagcct
gcacagatccgtgggaagactgtgtatatacagtactcaaatagacacgaaatagttaat
aacaagagccctggagatgtcccgggaaatgttttgctagttaccattgagggcgttgaa
gctggtgatgtcagcatcgatgtcattcacttggtattctcggcttttggttttgtccac
aaaattgctacatttgaaaaggctgctggttttcaggctttaattcagtatagtgatatt
cagactgcatctactgcaagggattcattggatggaagaagcatacccagataccttctt
ccaagtcatgtaaatgagtgttatttacgcatatcgtactctgctcacacagatttgaat
attaagtttcaatctcatcgaagcagagattatacaaatcctcatcttcctgtaaatccg
actgccatggatggtttacatcagcccgttgtaggccctgatgggaagaaaaaagaattt
gagagtaacgtgctacttgcttctattgagaatatgcagtatgctgttacagtggatgtt
ctgaatacagtattctctgcttttgggactgtccagaagattgcaatttttgagaaaaat
gggggaacgcaggcactgatacagtatcctgacattgcaattgcagctgttgcaaaagat
gcgttagaaggtcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtgaaggcatacagtgacaaaagtagagattacaccatcccg
atgcagcaggctactggatggcaaaaccctccagccgctccagcagttggctacacttcc
ggtggcgtacaacaggttcatgctcaggcagcgccatcgtcatcatggttccctaccatg
ccagccggcgtacaaacctacatatcgtctcctagctcgtttcctggtcaagcatatggt
gcagcccctcctcctgcttatgcagccgcagctattccacctttcagctcgccaaatgct
catcctccccccggagctccccagaccggaggctccgtgcccttgcatcagccgaactgc
cctccgggtggatctcctcatcctagtcaatccccatactacggttcatga
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