Salvia splendens (scarlet sage): 121768179
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Entry
121768179 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121768179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121768179
03036 Chromosome and associated proteins [BR:
sspl03036
]
121768179
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121768179
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121768179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
121768179
NCBI-ProteinID:
XP_042020495
LinkDB
All DBs
Position
15:complement(12152075..12161722)
Genome browser
AA seq
1028 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQPVFGQTSSATNNPFAPKPFGGNTSPFGSQTGGSIFGGMSTGV
FGAQSSSPFGSTSVFGASSSPAFGSATPTFGASTGSAFGNTSSAFGGSSVFGQKPAFGGF
GSNTTQSSPFGGSFQQSQPASGSNLFGSSTPFGAPSQPAFGASSSPAFGAPSTPAFGATS
TPAFGSTASPTFGSTSGGFGVSSSPFGSSTPAFGASSTPSFGASSTPAFGATASPAFGAT
SSPAFGATTTSAFGASSTPSFNFGSSPAFGQSTSAFGQSTSAFGSSPFGATSSFGAQSAS
FGAQTTTPAFGNSGFGQTAFGGQRGGSRVTPYSATPETDGATGTQPAGKLESISAMPVYK
DKSHEELRWEDYQLGDKGGPAPAGQATAAPGFVGPFSATPTPSFGQSSTNPFSSSTPSNL
FAPKTPAFNNSGFAPSTGAAFSSSPFGTSNTTSPFGSTSSTTTSLFGAAQPFGGNTSSSL
FNSSSPSPFGSPSIFGSSSSQGTGTAFGTSLGFGNTQSSPLFQSTTPTLGQSSSPFGQTT
AFGQTTSGFGQSNLFPTPSMGFSGNLFASSSSLPSSTGGALGFGQTTPSISTPFQSAQPA
PGSFNFSNFGQSQAAAPSGYTGTPGMFSNTAFGQAPGTQTTVAAQAAPITNPFGTLPTMP
QVSIGRAGISSSLQYGISSLPVVEKPVPVRISSLLTSRHLSQRRVKLPVRKYHPKSNWPK
VPFFNDDEETASTPKADALFVPRENPRALVIRPLEQWHSRSSAEKTKTTGTPMRENGELH
DDGYNSINGNRNKDASPREDSVENGLAKEQANPVKGNQKANGVRDGLSTEKGDSYITLTG
HRAGEAAIVYEHGAGIEALMPKLRHSDYYTEPRIQELAAKGRAEPGYCRHVKDFVVGRHE
YGSIKFFGETDVRRLDLESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFDK
KTGQQYVEGPRIGKYKEMLKRKAEDQGAEFVSYDPVKGEWKFRVNHFSAYKLGDDEDESC
ENVLTCFS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaagcaacccttttgggcagtcgtctagtagcccattcgggtctcaacctgtt
tttgggcaaactagcagcgctactaacaatccttttgcccctaaaccttttggtggcaat
actagcccttttggctcgcagacagggggttctatttttggcggcatgtctactggtgtt
tttggtgcccaatcttcttctccttttggatccacttctgtttttggtgcttcatcatca
cctgcttttggaagtgcaaccccaacctttggagcttccacagggtctgcatttggaaac
acatcttcagcatttggtgggtcctcagtatttggacagaagcccgcatttggtggtttt
ggatctaatactactcaatcaagtccttttggaggttcattccagcaatcacagcctgcc
tctgggagcaatttatttggctcatctacaccttttggtgctcctagtcaacctgccttt
ggtgcgtcaagtagtcctgcatttggggcacccagtactccagcttttggtgcaactagc
acccctgcctttggttctactgcaagcccaacatttggcagcacaagtggtggctttggt
gtgtcaagttctccttttggatcaagcactccagcatttggtgcttcttccactccatca
tttggggcttctagcacgccagcttttggtgccacagcttctcctgcttttggtgcaaca
agcagtccggcttttggtgccacaaccacttctgcatttggtgcttcaagtactccgtca
tttaatttcggatcaagtcctgcatttggccaatcaacatctgcatttggccaatcaact
tctgcatttggaagtagtccatttggtgcaacatcatcctttggagctcaaagtgcttca
tttggagctcagactacaacgcctgcatttggtaactcaggatttggccagactgctttt
ggagggcaacggggcgggagtagagtaactccatactcagcaacacccgagacagatggt
gccacaggtacacagcctgctggaaagctagaatctatctcagccatgccggtctataaa
gataaaagccatgaagaacttagatgggaggactaccagttaggagataaaggagggcca
gctcctgccggtcaggctactgctgctcctggatttgttggtccattttcagccacaccc
actccttcatttggccagtcatctacaaatcccttttcatcttcaacaccttccaatcta
ttcgctcctaaaacaccagcgtttaacaattcaggctttgcaccttcaactggtgctgcc
tttagttcttcaccttttggaacatcaaatacaactagcccttttggctctacatcatca
acaacaacctccttatttggtgcagctcaaccattcggaggcaatacctcttcttctctt
tttaactcttcaagcccatctcctttcggatcaccatctatttttgggtcttcatcatca
caggggactgggactgcatttggtaccagcttagggtttggtaacactcagtcttcccca
ttattccagtcaacgacacctacacttggacagagtagttcaccttttggacagacaact
gcatttggtcaaactacctcaggttttggtcagtcaaatttgtttcctacaccctctatg
ggttttagtggcaatctgtttgcaagcagttcatcacttccaagcagcactggtggcgcg
ttgggatttggtcaaacaactccttctatttctactccatttcaatcggcacagccggct
cctgggagcttcaacttcagcaattttggccagtcacaagcagctgctccaagtggctat
actggcacccctggcatgttcagcaatactgcttttggacaagcgccaggcacgcaaacc
acagttgctgcacaagcagctcccattacaaatccctttggaactttacctacaatgcct
caggtgtcaattggtcgcgcggggatttcctcttctcttcagtatggtatttctagcctg
ccagttgttgaaaaaccagttcctgtaagaatatcctctcttttaacatctcgacacctc
tcccaaaggcgtgtaaagcttccagttaggaaatatcaccctaaatccaattggccaaag
gtgcctttctttaatgatgatgaagaaacagcaagcacaccaaaagcagatgctctgttt
gtgccaagggagaatcctagagctctagtgatccgtccactggaacagtggcattctaga
tccagtgcagagaaaacaaagaccactggcactcccatgcgtgaaaatggtgagcttcat
gatgatggctacaattccataaatgggaacaggaacaaagatgcttccccaagagaagat
tcagtggaaaatggtctggctaaagaacaagctaatcctgtaaaagggaaccagaaagct
aatggtgtccgtgatggtctttccacagagaaaggtgactcatacataactcttacaggg
catcgagctggtgaagctgctatagtttatgagcatggagctggaattgaggcactgatg
ccaaagctccgccactctgactattataccgagccacggatccaggagttggctgcaaag
ggaagggctgagccaggctattgtcgccatgtgaaggattttgtagtgggaaggcatgaa
tatggtagcatcaagttctttggggaaactgatgtgcggaggctagatctcgagtctctg
atccaattcaacaatcgtgaggtgatagtttacatggatgagagcaagaaacccccggtt
ggacaaggtctgaacaagcctgccgaggttacactcctaaacataaaatgcttcgataag
aagacaggtcagcaatatgtggaggggccaagaatcggcaagtacaaagagatgctgaaa
agaaaagctgaggatcaaggtgctgagtttgtttcttacgatccagtgaaaggagaatgg
aagttcagagtcaaccatttcagcgcatataagcttggcgatgacgaagatgaaagttgt
gaaaacgtgcttacttgttttagttga
DBGET
integrated database retrieval system
