Salvia splendens (scarlet sage): 121768274
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Entry
121768274 CDS
T07627
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121768274
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
121768274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
DurN
zf-RING_2
Levi_coat
Motif
Other DBs
NCBI-GeneID:
121768274
NCBI-ProteinID:
XP_042020642
LinkDB
All DBs
Position
15:complement(4636587..4651947)
Genome browser
AA seq
1791 aa
AA seq
DB search
MSNPAGGGGFEGHHRGISLSNTVHSEVAPCLPLPSLPVFCGGRDQELRLFDNRGGASRRN
ASGADVAGRIADLLRNADVSYLNLKNEESIQPDGYVGKLNITNDVLRHEAESLQYVSPGP
GMESTNRGNLTQSKSFERSMPAINQVPTDSLGTTNYQQDHNANNDIINSSRKPKVKKRTK
ADIPSAPCPDSREGQDAAVGGFCEWLEDICNRAEIPSDDREETEWQSLTQSDLKALVNEI
MSIRSKNLLHIVPADTLSRILKVLDRQIHRAEGLSIDDCEKLDAEVVSSLYCALESIHAA
LVIMAHDGMPKQIYKEEYIERILDFSRHQILDVMFACDPAYRALHKPNYNLDDEEDDDAE
DFGSSSKKRRISKSVRVRKSTTNRMSGTVNIIVQKLCTIVSYLKQLLLIERLSDSCILQL
VRTSLQTLLVDNIQLLQLKVISLIGGIYYMYTQHRTYMMDETIQILLKLPLSKRVPRTYH
LPDEEQRQIQLVTALLIQIIHHCANLPEVVRLTPGNPSLDISIDADYPSKCHEAVTESCC
LFWSRILQRYTSTKNQDASELKSMMENLVMDLLTTLNLPEYPASAPILEVLCVLLLQNAG
PKSKDISARTMAIDLLGTIAARLKHDAVVCRNEKFWIVQVLMDSENSDPSYLRDVCAICL
DSTAERSSLECQGCHRPFHLDCIGGREQDASSRTFDCQVCLCEKQLLVLKTHCESESKDD
QKQNRISKKSSRASSSVTKQEIVQQMLLNYLQDAGSADELNLFMRWFYLCLWYKDDPASP
QKFLYFLARMKSREILRDSFSFSSLLTRDSVKKITLALGQKSSFARGFDKILQVLLASLR
ENSPVIRAKAMRAVSIIVEADPEVLGNKLVQTAVEGRFCDSAISVREAALELVGKHIASH
PDVGIKYFEKVAERIKDTGVSVRKRAIKIIKDMCTSSTDFSQSTTAFVAIISRINDEESS
IQDLVCKTFYEFWFEEPSGWQNRTFKDNSSVPLEVTKKTEQVAETLRRMSSHQPLAIVIK
RILVLDFFPQSAKAAGINPVLLSSVRRRCELMCKCLLEKALQVAETNSEEGEVRMLPYIL
LLHSFCLVDPTLCAPASDPSQFIITLQPYLKSQSDNRVAAQMLESILFIIDSVLPLLRKL
PETVAEELEQDLKQMIVRHSFLTVVHACIKCLCSVGKVSGKGASVIQYLIQLFYKRLDAL
GFDNKQQVGRSLFCLGLLIRYGSPMLDMSAFNPRNMDVASNINLFKKYLQAEDFIIKVRA
LQALGYVFIACPECMLQKDVGKILEATLSTCADARLKMQSLQNMYEYLLDAESRMEKDKA
SNDDNNPSADGTSVPVAAGAGDTNICGGIVQLYWNSILARCLDANEHVRQAALKIVEIVL
RQGLVHPITCVPYLIALETDPEEVNAKLSHHLLMNMNEKYPAFCESRLGDGLHLSFIFIR
TMSGDLPEMSNNKSPAKLFNNIKGKGDVGSSTFARHGVARIYKLIRGNRVSRNRFMSSIV
HKFETPTCSDSVIPFLMYCTEILALLPFTLPDEPLYLIYTINRVVQVSSGAVESNIKDFL
HLLQGNVHKTNGNGMVQASQLDSTTNPGSERNMETEGNPTLPMELPNHLYGEESCRDPNA
NPIPSRDPYTISASDFQKIQASFLAAGALQLLLKLKRHLKIVYGLDDIRCQAFSPNEPVK
PGESLGRQNIPFTISDINIDPPNTYEDVMRRYQEFKNALREDTVDYSTYSANIKRKRPPS
TSARRGKAVRMADMDDEDGYDDEDWGNSVARMNKSAGKRGSYMRTRQRQQL
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcccgccggcggaggtggtttcgaggggcaccacaggggcataagtctctcg
aacacagttcactcggaggttgcgccgtgcttgccgctgccctcgctcccagtattctgc
ggcgggcgcgatcaggaacttcgcctattcgacaaccgcggcggcgcttccaggaggaat
gctagcggcgctgatgtggcgggaaggatagctgatctcctccgcaatgctgatgtatct
tacttgaatcttaaaaatgaagaaagcattcaaccagatggttatgtgggcaagttaaat
ataaccaatgatgttttgagacatgaggcagaatcacttcaatatgtctctccaggtcct
ggtatggagtcaacaaatcgaggtaatttgacccaatcaaagtcctttgagcggagcatg
cctgccataaatcaagtgccaactgactcattagggacgaccaattatcagcaagatcac
aatgctaataatgatattattaactcttcccgaaaaccaaaagtgaaaaagagaacaaaa
gctgacataccgtcagctccttgtcccgattcccgtgagggtcaagatgcagctgtaggg
ggattttgtgaatggttggaggacatatgtaacagagcagaaattccttctgatgacaga
gaagaaacagaatggcaatcattgacccaatctgatcttaaagctctagtcaatgaaatc
atgtccattcgatctaagaatttactccacatagttccagctgacactctttcaaggatt
ttaaaagttttagatcgccagattcatcgagcagaaggactttcaatagatgattgtgag
aagttggatgctgaggtggtatcatccctttattgtgctctggagtcaattcatgcagct
ttagttattatggctcatgatggcatgcctaaacagatttacaaggaagagtatattgaa
aggatcttggatttttcaagacatcaaattttggatgttatgtttgcatgtgatccagca
tatcgggccctacacaaacccaattataatttggatgatgaggaagatgatgatgctgag
gattttggctctagcagtaagaagaggcgaatttctaagagtgtaagagttagaaaatca
acaacaaaccggatgtctggtacagtaaacattattgttcagaaattgtgtaccattgtc
agttatctcaagcagctgttgttgatagaacgcttatcagatagttgcattctgcaactt
gtgcggactagtttacagacacttttggtggataatatccagcttttgcagctgaaagta
atcagtttaattggtgggatttattatatgtacactcagcatcggacatatatgatggat
gaaactattcaaatacttctaaagctgccactctctaaaagagtaccaagaacttatcat
cttccggatgaagaacaaaggcagattcagttagtcactgctctattgattcaaattatt
catcattgtgcaaatcttcctgaagtcgtgaggctaactcctggaaatccttcactggac
atttctattgatgctgattacccctctaaatgtcatgaggcagttacagagtcatgctgc
ctcttttggagtcgaattcttcagcggtatacaagcacaaaaaatcaggatgcatctgaa
ttgaagtcaatgatggaaaatcttgtgatggatttgctcactactctgaacttaccggag
tatccagcttcagctcctattctagaggttctgtgtgtattactacttcagaatgctggg
ccaaaatcaaaagatatttctgccagaacaatggccattgaccttctcggtacaattgct
gcaaggttaaaacatgatgcggtagtgtgtaggaatgaaaagttttggatcgtacaggtc
ttgatggatagtgaaaatagtgaccctagctatctgagagatgtctgtgctatttgtttg
gattcaactgctgaaaggtctagtctcgaatgtcaaggctgtcataggccattccatctt
gattgtataggaggaagagagcaggatgcttcttctcgaacctttgattgtcaggtttgc
ttatgcgagaaacaacttcttgtgttaaaaacgcattgcgagtccgaatccaaggatgac
cagaaacaaaatcgtatttccaaaaaatcttcccgagcttcatcctcagtaacaaaacag
gagattgttcaacaaatgctcctaaattatttgcaggatgcagggtctgcagatgaacta
aacctctttatgcgctggttttatctttgtctttggtataaagatgatcctgcttctcct
caaaagttcctctacttcctcgcaaggatgaaatctagggaaattctgcgagactcgttt
tctttttcttctcttctgacaagggattcagtgaaaaaaattactttggcattgggtcaa
aagagttcgtttgctagaggatttgacaagatacttcaagtgcttttggccagcctgagg
gagaactcaccagtgattcgtgctaaggcaatgcgagcggttagtattatcgtagaagca
gatcccgaggttttgggtaacaagcttgtgcaaacggcagttgaagggaggttttgtgac
tctgctatatcagtaagagaagcagcacttgagcttgttggaaagcacattgcttcacat
cctgatgttggtataaagtattttgagaaggtagcagagaggattaaggatactggagta
agtgtccgaaaacgagctattaaaattatcaaggatatgtgtacctcctccactgacttt
tcacagagcaccactgcttttgtggcgataatttctcgtatcaatgatgaagaatccagc
atacaggacctggtctgcaagacattttatgagttttggttcgaggagccttctggttgg
caaaaccgtactttcaaagataacagttcggttcctctagaagtgactaagaagacagaa
caggttgctgagactttgagaaggatgtccagtcaccaaccccttgctattgtcattaaa
agaatcttagttcttgatttctttccccaatctgctaaagctgctgggataaaccctgta
ttactttcatccgtacgcaggcgctgtgagctaatgtgcaagtgtctgctggaaaaagca
ttgcaggttgctgagacaaacagtgaggaaggagaagtccgcatgcttccatatattctt
ctactgcattcattctgtctggtggatcctacattatgtgcaccagcctctgacccttca
cagtttattatcacactacaaccatatttgaagagtcagtctgacaatcgagtggctgct
cagatgctggagagcatattgtttataattgattctgtcttgccattattgcggaaactt
cctgagactgttgcggaggaacttgaacaagacctgaaacaaatgatagtccggcactct
ttcctgacagttgtccacgcttgcataaaatgtttatgctctgtggggaaagtatcagga
aaaggtgcaagtgttattcagtatcttatccagttgttctacaaacgtctggatgcattg
gggtttgataacaagcagcaagtaggtagatctctgttttgtcttgggttgttgatacgc
tatggtagcccaatgttggatatgtctgctttcaacccaagaaacatggatgtagcaagc
aatatcaacttattcaaaaagtatcttcaggctgaagacttcattattaaagttcgggca
ttacaggctttaggttatgtttttattgcttgtcctgaatgtatgttgcaaaaggatgtc
ggtaaaattttggaggcaactctgtccacctgtgctgatgctcgtctgaagatgcaatca
ttacagaacatgtatgagtatcttctggatgcggaaagccgaatggagaaagataaagct
agcaatgatgataataatccatctgctgatggtaccagtgtccccgttgctgccggtgct
ggcgatactaacatttgtggtggtatagttcagctatattggaatagcatcttagcaaga
tgtctggatgcaaatgaacatgtccgtcaagctgctctcaagattgttgaaattgtgctg
cgccaaggtcttgtacatcctattacttgtgtaccgtatctcattgcacttgaaacagat
ccggaggaagtaaatgcaaagttgtctcatcatctcttgatgaatatgaatgagaagtat
cctgctttctgcgaaagccgtcttggtgatggacttcatttgtcatttattttcattcgt
accatgagtggagatctccctgaaatgtccaataataagtccccagccaaattatttaac
aatattaagggaaaaggagatgttgggtcttcaacatttgcacggcatggtgttgctcga
atctataagctcattcgtggaaatcgtgtttcaagaaacagattcatgtcctccattgtg
cacaaatttgaaacaccgacctgcagtgattctgtgataccgtttctaatgtattgcact
gagattcttgctctactacctttcacattacctgatgaacctctttatttgatctatact
ataaaccgagtggtacaagttagctcaggggcagtagaatcaaacattaaggactttttg
catttattacaaggaaatgttcataaaaccaatgggaatgggatggtgcaagcctctcaa
ctggatagcactacaaaccctggtagtgaaagaaacatggaaactgaggggaacccgaca
ctacccatggagttaccgaatcatctttatggggaagaatcatgtagggatccaaatgca
aaccccataccctcgagagatccctataccatctctgcaagtgattttcagaaaatccag
gccagctttctagcagctggtgcactgcaactgcttctaaagctcaagaggcacttgaag
attgtttatggcctagatgatatccgatgccaggcattttctcctaatgaaccggttaaa
ccaggcgaaagtttaggacggcagaatattccattcactatcagtgatattaacattgac
cctcccaacacctacgaagacgtcatgcggagatatcaggaattcaagaatgccttaaga
gaagacacagttgactattcaacctactcagcaaacatcaagaggaaacggccaccctcc
acgagcgcaagacgagggaaggctgtccgaatggcagatatggatgatgaagatggctat
gatgatgaagattggggtaacagtgtggccaggatgaacaagagcgccggcaagagaggt
agttacatgagaacgaggcagcgacaacagttgtaa
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integrated database retrieval system
