Salvia splendens (scarlet sage): 121768275
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Entry
121768275 CDS
T07627
Name
(RefSeq) protein SPA1-RELATED 2-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
121768275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121768275
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
121768275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Pkinase
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
121768275
NCBI-ProteinID:
XP_042020646
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Position
15:complement(15373710..15381156)
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AA seq
1119 aa
AA seq
DB search
MCVSVIFAISGKYHKYLDSVLSLNLFSLLIIRAFLFYGSQFSPFAFAVQLLLLIVAFFIL
SPVKLFQKNPVLSNCESMDQTVGDEMPEPVDGTHIRHKENEFSITPGSSDMLQSEMVTPG
VDDYTHMARNRYSVILNAKDMDRIGSSEHASASPRCMDDAGVMVEELTLRNYDGKTLTVV
GSSNNRERTQTKKNQWQNLYQIGGRSGISNLHGRSGYKGKGQATSSAWEDEDNNFFPGLL
DQSQPPSDFSHNNIMENQLMDNDKGIPGHTLNSSGGIRTKILSKSGFSEYFIKSTLRDKG
VIHKTHACRGSGTVSGDQVNPKCGIAGSTNTAAPLGCSGKPVSSLSDRTNIDGLSLREWL
EADGKKANKVEKLNIFRQVVDLVDFSHVQGSSLQDLRPSAFKLSGANLVMYLGSSVRAGV
TDNFTDQDNYQSSLNRNDKRPINQRLMSIENQHVKKQRSGDKLSTIQRWPQFPSRSGTRF
ATNNVSKDPSNDVHEEQGPIAKTKNYSKQFGHDVPNSLHALRSSTNFMLEEKWYTSPEQF
SEKGCTFASNIYCLGILLFELLGSFDSGRSHAAAMLDLRHRILPPSFFSENPKEAGFCLW
LLHPEPSSRPTTREILQFELLSGTQELPRGELLSSIHEEDEESDLLLYFLATLTEQKEKY
ALSLSEQIQCIEADIQEIEKRKPRKSLVLSSLLQKSPAAACGSSASVDPYLKATNDAETR
LMSNIRQLEHAYFSMRSNYQLADSDSATDRDVELLRSHELRCTLGKEENKTEDRLGGFFD
GLCKYARYKKFKVRGILRNGEFNNSANVICSLSFDRDEDYLATGGVSKKIKIFEYKALFD
DSVDIHYPVVEISNKSKLSCICWNSYIRNFLASTDYDGIVKLWDASTGQGFSEFVEHSQR
AWSVDFSRVDPTKLASGSDDRLVKVWSINDRNSLCTIRSHANVCCVQFSPHSSHLLAFSS
ADYKTYCYDLRNVSVPWCVLAGHEKAVSYAKFLDSGTIVSASTDNTLKIWDLKKTSSNSL
SRDACISSLRGHSNEKNFVGLSVNDGYITCGSETNEVFAYYKSLPMPISAHKFGSIDPMT
GKETEDDNGQFVSSVCWRPKSNTVVAANSTGCIKLLQLV
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgagtgtcattttcgccatttcaggtaagtaccataaatatcttgactccgtt
ctatctctaaatctcttctctttattaattattagggcttttttattctatggttcacaa
ttttccccttttgcgtttgctgtgcagcttttgcttttgattgtcgccttttttattctc
tctcccgtcaaactatttcagaaaaatccagtgctgtccaattgcgagagtatggatcaa
acagttggtgatgagatgcctgaaccggttgatggtacacatatccggcataaagagaat
gagttctcaataacacctggcagctctgacatgctgcagtcagaaatggttacacctggt
gttgatgattatactcatatggcaagaaatcgatattcagttatactgaatgcaaaagac
atggacagaattggttcttctgaacatgcgagtgccagtccacgctgtatggatgatgct
ggggtaatggttgaagagttgacgctgagaaattatgatgggaaaacgttgactgttgtg
ggtagttcaaacaatagagaacgaacacaaactaaaaaaaatcagtggcagaatttgtat
caaataggtggcagatcaggaatcagcaaccttcatggacggagtgggtacaaaggaaaa
ggtcaggcaacctcgagtgcctgggaagatgaggataacaatttctttcccggattacta
gatcaaagtcagccaccatcagattttagtcataataatattatggaaaatcaactaatg
gacaatgataaaggtattccaggccatacgttaaattcttctggaggcattaggacaaag
atcttgtctaaatctggtttttcggagtactttattaaaagtacattgagagacaaagga
gtaattcataaaacacacgcctgcagaggatctggtactgtgtctggggaccaggttaat
ccgaagtgtggcattgctggttcaacaaatactgccgcaccattaggttgttctgggaag
cctgtttcatctctttcagacagaaccaatattgatggattaagtttaagagaatggctg
gaagctgatggaaagaaagcaaataaagttgaaaaactgaatatatttagacaagttgtg
gatcttgttgatttttcacatgttcaaggatcttcgcttcaagatttaaggccttccgcc
ttcaaattgtcaggggcaaatctggtcatgtatctaggatcttctgtacgtgcaggggtc
acagataattttacagatcaagacaattaccaatctagtcttaatcgtaacgataagagg
ccaataaatcaaaggttgatgtccattgagaaccagcatgtgaagaagcagagatcaggt
gataaattgagcactatccaaagatggccccagtttccatcaaggtctggcactagattt
gcgaccaacaatgtttccaaggatcctagcaatgatgtacacgaggagcagggtcctata
gcaaaaactaagaactacagcaaacagtttggccatgatgtgcctaattcattacatgca
ttgcggtcctctacgaattttatgttagaagagaagtggtatacaagcccagagcagttc
tctgagaaaggctgtacctttgcatcaaacatatactgcctgggaattcttctatttgag
ttacttggctcatttgattctggaagatctcatgctgctgccatgcttgatttacgtcat
aggattctccctcccagctttttttcagagaatcccaaggaagctgggttttgcctttgg
ttacttcaccctgagccttcatcacggcccacaaccagagagattttgcagtttgaactt
ctaagtggtactcaagaactacctcgaggtgagttgttatcatctattcatgaagaagac
gaggaatcagatttgttattgtatttccttgccacattaaccgagcaaaaagaaaagtat
gcactcagtctatcagaacaaatacagtgcattgaagctgatattcaagagattgagaaa
cgcaaacctagaaagtcattggttctatcttctttgcttcagaagtcacctgctgctgca
tgtgggagcagtgcaagtgtagatccatatttaaaggctacaaatgatgcagaaactagg
ttaatgagtaatatcaggcaactcgaacatgcttacttttcaatgagatcaaactatcag
cttgcagacagtgattctgccactgatagggatgtagaactcctgagaagtcatgaattg
aggtgcactctgggaaaggaagagaacaagactgaagatcgtctagggggcttctttgac
ggtttgtgtaaatatgctcgctacaaaaagttcaaagtaagaggaatactgcggaatgga
gaatttaataattctgcaaatgtgatctgctctttaagttttgaccgtgatgaagactac
ttagctacgggaggggtgtcaaagaagataaaaattttcgaatataaagctctctttgat
gattcagtcgatattcattatccagttgttgagatatcaaataagtcaaagcttagttgc
atttgctggaacagctatatcagaaacttccttgcttcgacagattatgatggcatagtc
aagttatgggatgcctcaaccggtcaagggttttctgagtttgttgagcatagtcaaagg
gcttggtctgttgacttctctcgtgttgatcctacgaaactagccagtggcagtgatgat
cgtttggtgaaagtatggagcataaacgatcgaaatagtttgtgcacaataaggagccat
gcaaatgtttgctgtgttcagttctcacctcactcctcccatttactggccttcagctct
gctgattataagacctattgctatgatcttcgcaatgtttcagtaccttggtgtgtgttg
gcgggccatgagaaagctgtaagctatgcaaaattcttggactcaggaacaattgtttct
gcatccactgacaacacactgaagatttgggatttaaagaagacaagttccaatagtttg
tcaagggatgcttgtatttcaagtctcagagggcattctaatgagaagaactttgttggc
ctatcggtgaatgatggttatataacatgtggttccgagacaaatgaggtatttgcctac
tataaatctctgcccatgccaatttctgcccacaaatttggctccattgatcccatgact
ggcaaggagacagaagatgataatggacagttcgtttcaagtgtttgctggagacccaag
tcaaatacggttgttgctgctaattcaactggatgtatcaaactcctacagttggtttag
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