Salvia splendens (scarlet sage): 121768467
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Entry
121768467 CDS
T07627
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121768467
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121768467
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
RRM_10
TGF_beta
Motif
Other DBs
NCBI-GeneID:
121768467
NCBI-ProteinID:
XP_042020924
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All DBs
Position
15:16759209..16766231
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AA seq
437 aa
AA seq
DB search
MAEPSKVIHVRNVGHEIAESDLLQLFQPFGVIAKLVMLRAKNQALLQMQDVPSAVNALQF
YSNVQPSIRGRNVYIQFSSHQELTIMDQSSQAHADEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQSHQSAILARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPSLPSEQKGKSSQLGYGDPSIYPHAVGFAQLGNAAAIAAAFGGGLP
PGISGTNERCTVLVSNLNADRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQLGDGFQA
ELAVHFLKGAMLFGKRLEVNFSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSPTK
MIHISTLPQDVTEEEIVNHLEEHGTIASTKLFEMNGKKQVLVLFENEEQATEALVCKHAT
SLGGSTIRISFSQLQTI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccctcaaaagtcattcatgttcgtaacgtgggtcatgaaattgctgagagt
gacttgttgcagctgttccagccatttggggttatcgccaaacttgtgatgcttcgagcc
aagaatcaggccctcctacaaatgcaagatgttccttctgcagtaaatgcattgcagttc
tacagtaatgtccaaccaagcataaggggcaggaatgtttatatccaattctcatcacac
caggaactaacgattatggatcaaagttcgcaagcacatgcagacgagcctaaccgaatc
ctcttagttacgatacatcacatgctatatcctattactgtggaagtgctgcatcaagtt
ttttctccccatggatttgtagagaagatcgtcacgtttcagaagtcggctggttttcaa
gctctaatacagtatcaatcgcatcaaagtgctatcttagctaggaactcccttcaggga
cgaaatatatatgacggttgctgtcagctagacatccagttctcaaaccttgatgaattg
caagtgaattataataatgagcgttctagggatttcacaaacccttccttgccttcggaa
caaaagggcaaatcctctcaacttggatacggagatccaagcatatatccccatgcagtc
ggatttgcacagttgggcaatgctgcggcaattgctgctgcctttggagggggtctccca
cccggtataagcggtacaaatgagcggtgcacagttcttgtatctaatctgaatgctgat
agaatagatgaggataagctgtttaatttgttctcgatatatgggaacattattagaatc
aaacttctccgaaacaaaccagatcatgcattggtacaattgggtgatggttttcaggct
gaactggctgttcattttttgaagggggctatgctgtttggaaagcgcttggaggttaac
ttttcaaagcatccaaacattacaactggagctgatacgcatgagtactccaactcaaat
ctcaatcgtttcaatcgaaatgcagccaaaaattacaggtattgttgctcaccaacaaaa
atgatccacatctcaactctcccccaggatgtaactgaagaagaaatagtaaatcatttg
gaagagcatggaacaattgctagtacaaaactgtttgagatgaatggaaagaagcaggtt
cttgtcctttttgaaaatgaggagcaggctacagaagctcttgtgtgcaagcatgccact
tcccttggtggttcaaccattcgaatttccttctctcagttgcaaaccatttga
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