Salvia splendens (scarlet sage): 121768507
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Entry
121768507 CDS
T07627
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121768507
03410 Base excision repair
121768507
03420 Nucleotide excision repair
121768507
03430 Mismatch repair
121768507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121768507
03036 Chromosome and associated proteins [BR:
sspl03036
]
121768507
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121768507
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121768507
DNA Replication Termination Factors
ELG1-RFC complex
121768507
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121768507
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121768507
Check point factors
HRAD17(Rad24)-RFC complex
121768507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
AAA_11
Mg_chelatase
AAA_5
AAA_14
AAA_assoc_2
ResIII
AAA_24
AAA_2
SLFN-g3_helicase
nSTAND3
AAA_28
PhoH
AAA_19
AAA_30
DUF3853
AAA_7
AAA_18
DUF815
NPHP3_N
Parvo_NS1
IstB_IS21
RNA_helicase
AAA_25
ATPase_2
DNAX_ATPase_lid
TIP49
bpMoxR
NB-ARC
Motif
Other DBs
NCBI-GeneID:
121768507
NCBI-ProteinID:
XP_042020978
LinkDB
All DBs
Position
2:6987900..6991275
Genome browser
AA seq
341 aa
AA seq
DB search
MAPVLPSSQQWVEKYRPKQVKDVAHQEEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL
AIAHQLYGPELYRSRVLELNASDDRGINVVRTKIKNFAAVAVGSARQGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEDIMTS
RILYICNEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSITSKDLISVSGVIP
DDVVQVLFTACRSGDFDMADKEVKNVIAEGYPASQMLNHLYDVVVESDDIPDDQKARICK
KFGEADKCLVDGADEYLQLLDVASNITRALNNMPQEFPFGS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttttaccgagctcccagcaatgggtcgagaaatatcgaccgaagcaagtg
aaggatgttgcgcaccaagaagaggtcgttcgagttcttaccaacactttggaaacaacc
aattgtccgcacatgctattttatggccctcctggcactgggaaaacgactacagctctt
gccattgctcatcagctttatggccctgagttatacaggtctagagtactggagctgaat
gctagtgatgatcgtgggataaatgttgttcgtacgaaaataaaaaactttgccgctgtt
gctgttggctctgcacgtcaaggtggttatccttgcccaccttataagatcataattctt
gatgaggctgactcgatgactgaagatgcccagaatgccttgcgacgcaccatggagaca
tactcaaaagttacaagattcttcttcatatgtaactacatcagcagaattatagaaccc
cttgcatctaggtgcgcgaaattcagattcaaaccacttacagaagacattatgacatct
cgcattctatacatctgcaacgaagaaggtcttaacttggattcagaggctctttcaacc
ttaagttctatctctcaaggtgatctccgccgtgctataacgtatctacaaggtgctgct
cgcttattcggatcctcaattacatctaaggacttaatcagcgtgtctggtgtcatccct
gatgatgttgtgcaggtcctctttaccgcttgcagaagtggtgatttcgacatggctgat
aaggaagtgaaaaatgtgattgctgaaggctatccagcttctcagatgcttaaccatttg
tatgatgtagttgtcgaatctgatgacataccagatgaccagaaagcaagaatatgcaag
aaatttggagaggccgataagtgtcttgtagatggagcggatgagtatttgcaactgttg
gacgtggctagcaatataacgcgtgcgctcaataatatgccacaagagttccctttcgga
agttag
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