Salvia splendens (scarlet sage): 121769002
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Entry
121769002 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121769002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121769002
03036 Chromosome and associated proteins [BR:
sspl03036
]
121769002
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121769002
Coactivators
SAGA/TFTC/STAGA complex
121769002
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121769002
STAGA complex
121769002
TFTC complex
121769002
SAGA complex
121769002
SLIK complex
121769002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
121769002
NCBI-ProteinID:
XP_042021572
LinkDB
All DBs
Position
15:1138427..1144770
Genome browser
AA seq
743 aa
AA seq
DB search
MAENSPSSSSPPKPLPVQQSSAMIEPPSNSQQLQPLQSPSPSLDHQQQQQQQQLMQSQQQ
QLVQSQQQQLVQSQQQLVQQQPQQQQLQQLQQQIMQQQGNNSSVNGGSNLIGVSNFQGMQ
RNPSISRLNQMQQSGSINSQLGMMRQQHQQQQNSSAIYGQMNFGGMSVTQQQQQSSSVGI
NGGNSSQQQQQQMGQQSQLQQQIGQQSQLQQQMGQQSQLQQQMGQQSQLQQQMGQNQLQQ
QLGQQNQLQQQLGQQNQLQQQQQQIGQQNQLQQIGQQSQLQQQVGQQSQLQQQLGGQGSM
QQQQMGQGQLQQSQMGQMAGGNLSRSALMGQTGHLPMLSGQAAQFNLQNQFLNSPRQKAG
FMQGSQFHQGNSPGQSLPGMQAMGMMGSINLASQLRPNSTLAYAQQRMTASQLRQHLSQQ
NALTTGQGQNIARTSFMNAQIAGLAQNGQPGMMQNAISQQQWLKQMPAISSPNTSSYRLQ
QQVLMQQQLASSQLQQQPQLSQIVQQQTQAQSQMHQQKQQQQLQPPMQQPQQPPQQQLFH
QQQSPRIAGPGGQKSVSLTGSQPDATGLGATTPGGSSSHGTEAGNQLLGKRKIQDLVSQL
DFNGKLDPEVEELLLEIADNFIDSVTTFACTLAKHRKSSTLEAKDVLLHLEKNWKLTIPG
YSSEEKKQSTENPPTDAHKKRMDVIRTLTEPVQSETNIGAKQMIRQGSGNQVGQNHMIKP
SPSSEQLVSQSAVPQMLQQSTRF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaattcgccttcatcgtcttccccaccgaaacccttaccagtgcagcagagc
tccgccatgattgaacctccttctaattcgcaacaattacagccgcttcaatccccatct
ccgtcgctcgatcatcaacagcagcagcagcagcagcaattgatgcaatcgcagcagcag
caattggtacaatcgcagcagcagcaattggtacaatcgcagcagcagttggtacaacag
cagccgcagcagcagcaattgcagcagctacagcagcagataatgcagcagcagggcaac
aacagcagcgtcaatggcggtagcaatttgataggagtttctaattttcagggtatgcaa
aggaatccttcgatatctaggcttaatcagatgcagcaaagtggtagtattaatagtcag
ttaggaatgatgagacaacagcaccaacaacagcagaattcgtcggcaatttacggtcag
atgaattttggtggaatgagcgtgacgcagcaacagcagcagagcagtagtgttggtatc
aatggaggcaatagcagccagcagcagcaacagcagatggggcaacaaagccaattgcag
caacaaatcgggcagcaaagccaattgcagcagcaaatggggcaacagagccaattgcag
cagcaaatggggcaacagagccaattgcaacagcaaatggggcaaaaccagttgcagcag
cagttagggcagcaaaatcagttgcaacagcagctggggcagcaaaaccagttgcagcag
cagcagcagcaaattgggcaacagaatcagttgcagcagatcggccagcaaagtcaactg
cagcagcaagtcgggcaacagagtcagttgcagcagcaactaggaggacagggctcgatg
cagcagcagcaaatggggcagggccaattgcagcaatcacaaatggggcagatggctggt
gggaatttgtcgaggtctgctctgatggggcagactgggcatttgccaatgttatctggt
caagcagcccagtttaatttgcaaaatcagtttttgaattcgccacgtcagaaggcgggg
ttcatgcaagggtctcagttccaccagggtaattctcctgggcagtcattgcctggaatg
caagcaatgggaatgatggggtcaattaatctggcttctcaactaagaccaaatagcaca
cttgcttacgcccagcagagaatgacggcaagccaactaaggcagcatctttctcagcaa
aatgcacttactactggtcaggggcagaatattgcaaggacgtcatttatgaacgcgcaa
attgctgggctggctcagaatggacaaccgggtatgatgcagaatgctatatctcaacag
cagtggttaaagcaaatgccagcaatatcctcccccaacacttcttcatatcgtcttcaa
caacaggtgctcatgcaacaacaactagcttcttcccagttgcagcaacaaccgcagttg
tctcaaatagtacagcagcaaacacaggcccagtcacagatgcatcagcagaaacaacag
caacagctgcagccgccaatgcagcagccgcagcagcctccacaacagcagcttttccat
cagcagcagtcaccaagaatcgctggaccaggagggcagaaatcggtgagtttgactgga
tcacagcctgatgccactggattaggagcaactacaccaggtggaagttcaagccatggc
acagaagctggtaatcaacttcttgggaagagaaagatacaagatttagtgtcacagttg
gatttcaatgggaaactggaccctgaagttgaagagcttctgttagagattgctgataac
tttattgattcggttactacatttgcatgcaccttggcaaagcatcgcaaatcttcaacg
ttggaggccaaggatgtcttgctgcatttagagaaaaactggaaactgaccattcctggg
tattcgagcgaggagaaaaaacaaagtactgaaaatccccctactgatgcccacaaaaag
cgtatggatgtgattcgtaccttgacggaacctgtacaatctgagacaaatattggagct
aagcagatgatcaggcagggatcaggaaatcaagttggtcaaaaccatatgataaaacct
tctccaagctccgagcagttagtttcacagtctgctgtgccccaaatgctgcagcagagt
actagattctga
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integrated database retrieval system
