Salvia splendens (scarlet sage): 121769070
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Entry
121769070 CDS
T07627
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121769070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121769070
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
121769070
Prokaryotic type
Archaeal type
TFB
121769070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
REC102
Motif
Other DBs
NCBI-GeneID:
121769070
NCBI-ProteinID:
XP_042021681
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All DBs
Position
15:18363816..18366857
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AA seq
501 aa
AA seq
DB search
MRCPYCSSGQGRCATSSSGRSITECASCGRVVDERQTQPQHLFHLRAHDTPLCLVTSDLP
LPKTPSDDEDPFEPTGFITAFSTWSLEPYPVFAHSSLSFAGHLAELERVLETTSQGTASG
PSVVVDNLRAYLQIIDVASILGLDCDISDHAFQLFRDCSSATCLRNRSVEALATAALVQA
IREAQEPRTLQEISTAANLPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLN
KSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTL
RKVYKELLENWDDLLPSNYNPVVPPEKAFPTATISSGRLSSSRGDLVEGTPLEKHTESRH
TKPTETLGTSLQTKGKESAASESKESFHRAYNQTMLGTPFWKPQVPVGISSTQRPDSTQN
MEIDLQCNIGEDKRLDTDATAASSSLRHVQFPSPPALAAGVVPWPFRPPPTAAMQFMQLH
KGGSDMVDKGFMPPNINDKFN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcccttactgttcctccgggcaggggcggtgcgccaccagcagctcgggccgg
agcataactgagtgcgcctcgtgcggccgcgtggtggatgagcgccagactcagccgcag
cacctcttccacctccgcgctcacgacacccctctctgcctagtcacttcggacctcccc
ctccccaaaaccccctccgacgacgaagaccccttcgagcccaccggcttcatcaccgcc
ttctctacctggtccctcgagccctaccctgtcttcgcccactcctccctctccttcgcc
ggccacctcgccgagcttgagcgggtcctcgaaacgacatcgcaggggaccgcttcgggc
ccctccgttgttgttgataatcttagggcttatttgcagattatcgatgtggcttccatt
ctcggattggattgtgatatatcggaccacgcctttcagctatttagggattgctcctcc
gccacttgtttgaggaaccgtagcgttgaggcgctcgccactgccgcgctcgtgcaggcc
atccgagaagctcaggagccgaggaccttgcaggaaatatcgaccgctgcaaatctaccg
cagaaagagatagggaagtacatcaagatacttggagaagctctacaactgagtcaacct
attaatagcaattcaatatctgtacacatgccgaggttttgtacacttctccagctcaac
aagtctgctcaggagctggcaacacacattggtgaggttgtgatcaacaagtgcttctgc
acacgcagaaatccaataagcatatctgcagctgctatctatttggcatgtcagctggaa
gataagcgcaagacacaagctgaaatctgcaaggtgacgggtcttacagaagtcactttg
cggaaagtatacaaagagctattggagaactgggacgatcttctcccatcaaattacaat
cctgttgttcctccagagaaagcatttccaactgccactatttcctctgggcgcttatca
tcatctagaggtgatctagttgaaggaactccccttgaaaagcacaccgagagcaggcat
acaaaacccactgaaacgttaggcacatcccttcagaccaaaggcaaagagagtgctgct
tctgaaagcaaagagagtttccacagagcctacaaccaaacaatgcttgggacaccattc
tggaagccccaggttcctgttggaatttcttctactcagagacccgattcgactcaaaat
atggaaattgatttacaatgcaatattggggaggataaaagattagatacagatgcaacg
gctgcttctagctccctgagacatgttcagtttccttctccacctgctttagctgctggt
gttgtgccgtggccttttcggcctccaccaactgcagcaatgcagtttatgcaacttcac
aagggaggatcagatatggtagataaaggctttatgccaccaaatataaatgataagttc
aattag
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