Salvia splendens (scarlet sage): 121769076
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Entry
121769076 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121769076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121769076
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121769076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
121769076
NCBI-ProteinID:
XP_042021688
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Position
15:5682488..5686091
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AA seq
476 aa
AA seq
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MAFSFSPQQPQQSLFQTPIQQPSPFQPQQQQQQSPFQLQLSQPQQPQSQPQPQQQPQLYL
FTNDKVPASYGTKWADLHPDSQKVLLQIEEKILEYRDESQRLDQCSRLFDSSVSNNGFEL
DASSIVQELGGITISMERQKATLQELMTVVKDMLRNTEVAVRSFMILRPRFLHQNKNSPA
GATAPSQPSGATVTQTSSGQPAGNSMAPIFDFYSGLPKKPSPFLQQTVARFEKYLSECRQ
WIEELEQLLLLDSGKHSLNSSSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMRTAY
LADQRHRGDENDPFLEADRRETAKQEAAARRVHPTIHLPNVPQPSGQATGLLALSAPTGA
STSTNPSSSTTAPASSGTGSLFFPTPAAASSAPSLFSTPTSSASFSSLLGTAASQSSPFS
SLSASSSAFGISTPISSTPAAAPAFSMPFATGAATGSGASFGMASKARAKSRTGRR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcattctcattctcccctcagcagcctcagcaatctctattccagactcctattcaa
caaccctcgccgttccaaccccaacagcagcaacaacaatctcctttccagttacaattg
tcgcagccacaacagccgcagtctcagccacagccgcagcaacagccgcagctctatctc
ttcacgaatgacaaagttcccgcttcttatggtaccaagtgggctgatttacatcctgat
tcgcagaaagtcttgcttcaaattgaggagaagatattggagtacagagacgaaagccag
agattggaccaatgcagcaggctttttgattcgtctgtctctaacaacggatttgagctt
gatgccagctctattgtgcaggaactgggtggaattaccatttctatggagaggcagaag
gcgaccctgcaagagcttatgactgttgtgaaagatatgctgcgaaatacagaagtagct
gttcgatcttttatgattttacggcccaggtttcttcaccaaaataaaaattctccagcg
ggtgccactgcaccatcccagccttctggggcaactgtcactcaaacatcaagtggtcag
cctgcgggaaactccatggctcctatttttgatttttacagtgggctaccaaagaagccg
tcaccctttttgcagcaaactgttgcccgatttgagaaatatctttcggagtgtcgtcag
tggattgaagaattagaacaactgctacttttagactctggaaaacattctttaaattcg
agttcttcattattgcaatctctgcctaaagtcatgactaacgtacatgacttctttgtt
catgttgcagcaaaggtggaaagtattcatcagtacatcgaatctatgagaacagcatat
cttgctgaccaacgccatcgaggagatgagaatgatccatttcttgaagctgataggagg
gaaacagccaaacaggaggctgcagctcgaagggttcatcccactatacatttacctaat
gttcctcaaccatctggtcaggctacaggactcctagccttgtcagctccaactggagca
tcaacttcaacaaacccgtcaagctctactactgcaccagcatcaagtggaactggatct
ctattctttcctactcctgctgctgcctcatcagcaccctctttattctcaacccctacc
agttcagcttcattctcatctttgttaggaactgctgcttcacagtcatcaccttttagt
tccttgtctgcttcctcatctgcctttggtatttccacacccattagttcaacccctgct
gcagcgccagcattctcgatgccttttgctacaggagctgcaactgggtcaggagcaagc
tttggaatggcatcaaaggcgagagcgaaaagtcgcacagggcggcgctag
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