Salvia splendens (scarlet sage): 121769377
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Entry
121769377 CDS
T07627
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121769377
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sspl01009
]
121769377
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121769377
Protein phosphatases and associated proteins [BR:
sspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121769377
Spliceosome [BR:
sspl03041
]
Common components
Common spliceosomal components
SR proteins
121769377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_DEAH11
RRM_5
RRM_occluded
Corazonin
Motif
Other DBs
NCBI-GeneID:
121769377
NCBI-ProteinID:
XP_042022103
LinkDB
All DBs
Position
15:complement(14931343..14935482)
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AA seq
217 aa
AA seq
DB search
MTKGERTSPPESRTSPPGSKTSPPKSKTSPPESRTSPRHSSRRSRSLSRSRRSRSRSRDS
EDALNPGNNLYVTGLSTRVTETELENYFKCEGKVVKCHLVRDPHSKESRGFAFVTMETTK
DAERCIKNLNRSVIEGRLITVEKAKRKRERTPTPGKYEGVKNKRGNSWNRRRSRSYSPRR
RHDRDNDNRERHGVHSSTDSRRGGDDGHHHRRHKQRS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggggaaagaacctcaccgccagagtcgagaacctcaccaccagggtcgaaa
acctcaccaccaaagtcgaaaacctcaccaccagagtcgagaacctcaccgcgacactca
agtcgcaggtcgcgatctttatccaggtcccggagaagtcgttctaggagccgtgattct
gaggatgctcttaatcctgggaacaatctttatgtcactggtctttctacaagggttact
gaaactgaactcgaaaattatttcaaatgtgaaggaaaggttgttaagtgccatttggtc
agagaccctcatagtaaggagtcccgtggttttgcatttgttactatggagaccaccaaa
gatgcagagcgttgtattaagaacctgaaccggtctgttattgaaggccgattaattact
gttgaaaaggctaaaaggaaacgagagagaactccaactcctggaaagtatgaaggtgtt
aaaaataaaagaggaaacagctggaacaggcgaagatctcgtagttactcacctcgtagg
agacatgatagagataatgataatcgggaacgacatggggtacattcctccactgatagc
aggaggggaggtgatgatggtcatcaccataggaggcacaaacagcgttcctag
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