Salvia splendens (scarlet sage): 121769440
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Entry
121769440 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121769440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121769440
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121769440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
121769440
NCBI-ProteinID:
XP_042022176
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All DBs
Position
15:17391836..17397374
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AA seq
862 aa
AA seq
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MTSDADMSGWTGLLHSSSKLIEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRAEAPSQS
IAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPAEATTVEEYLQQVHEMAMLSAVQEA
QKDNLRSFNDYMMSVLQEDWQKEKRDFLQSLNRISILPRTNVHDSSSGVSRQGQIVPMTS
SPGLSSGQSGAELALLADKPVEKKAAAYAEVVKNLNSARQHGSPFKPAAAFKSAYESLRM
DSSGSKSVSMLKIWHLIMTVMGEDPSVKRSVSKRMSLVIGARHHLEWGHEKYVMDMIHSH
PAQAALGGAVGNLQRIRAFLRMRLREYGVLDFDAGDTRRQPPIDTTWQQIYFCLRTGYHE
EALGVARTSRVSQQFTTLLAEWISTGGMVSTETAASASEECEKILRMVDRVGRPSYDKKK
LLLHAIISGSRRLIDRLLRELPTIFNTIEDFLWFMLSAVRESSGGSSSSVVLNGGVSSYS
LEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPGVLHLSKDIGDSGFSVDSVHIS
IVLADYGVLPEGSASGQKLGVMDALAEASSIIRQYGAEYLRHGYLSMALEYYAQAAAAVG
GGQLSWIGRASMDQQRQMTLMLKQLLTEILLRDGGISLLLGSRGAGEGQLGRFLTDGQKR
QEFLFEAARQCQDAGLYDKSIEIQKRIGAFSAALDTINKCLSEALCALSRGTLDGESRIT
GLIHSGNDILETFKYYPEISPQERATAIEQQNVLRQLEAILAIHKLARSGNKLDALREIA
RLPFLPLDPRSTDSTPDAFQNVSPHVEACVPGLLKDALNCLDNVADTDGSLRAMKAKIAN
FLANNLNRSWPRDLYEKIARSL
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgatgccgacatgagtggttggactggtctgctgcattcttcttccaagcta
atcgaacaagccgctccttctgctcagtttccgccgcttcagaggaatttggatcagttg
gaggctctctcgaagaagctcaaggccaaaaccctgcgcgccgaagctccgtcacagtct
attgcggctactaggctattagctcgggaggggttaaacgcagagcagctagctcgtgat
ctcaagtcctttgaattaaagaccacatttgaagatgtatttcctgcggaggcaacaaca
gttgaagagtatctccaacaggtccatgaaatggcaatgctgtcagctgttcaggaagct
cagaaagataatcttagaagtttcaatgattatatgatgtctgtattgcaggaggactgg
caaaaggaaaaaagagattttcttcagagcctgaatcgaatttcaatactaccgagaaca
aatgtccatgattcgagcagtggggttagtcgccagggtcaaatagtacctatgacttca
agccctgggctttcgtcaggacaatctggtgccgagctggcacttttggctgataaaccc
gttgaaaaaaaggctgcagcatatgcagaagttgtgaagaatcttaacagtgctagacaa
catggttcacccttcaaacctgctgcagcttttaaaagtgcatatgaaagtctgagaatg
gactcatctggatcaaaatctgtcagcatgctgaagatttggcatctaattatgacagta
atgggtgaggacccaagtgtaaaacggagtgtttctaagagaatgtctttagtgattgga
gctcggcaccatctggagtggggacatgagaagtatgtaatggatatgattcacagtcat
cctgcacaggctgctcttggcggggctgttggaaatctgcaaagaattcgtgccttcctt
cggatgcgtttaagggaatatggagttcttgactttgatgctggtgatacccgtcgacag
cctcctatagacaccacatggcagcagatatacttttgcctgagaactggataccatgaa
gaagctctgggtgttgcacggacatctcgtgtctcccagcaattcactacgctgcttgct
gagtggatttctacgggaggtatggtatcaacagagactgcagcttctgcttcagaagaa
tgcgagaaaatattaaggatggttgatcgagttggtcggccatcatatgacaagaaaaag
ttactcctgcatgctattatatctggctctaggaggctgattgacaggttgcttagagag
ctacctactatctttaatacaatcgaagatttcttatggttcatgttgtctgctgtacgg
gaaagctctggtggttcctcctcttcggttgtcctcaatggtggagtatcatcttacagt
ttggaggatttgcaggcgtatctaaataaatttgagccatcgtattatactaagaatgga
aaggaccctttggtttatccatatgtattacttttaagcatccagcttcttccaggcgtt
cttcatttgtcaaaagatatcggagatagtggatttagtgttgattcagtgcatatatca
attgtgctagctgattatggcgtccttcctgaaggttctgcgtcaggacaaaaacttgga
gtgatggatgccttggctgaggcgtccagcatcattaggcaatatggggctgagtatttg
cgccatggttacctttcaatggcattagagtattatgctcaagcagctgccgccgtgggt
ggtgggcaattgtcatggattggaagagctagcatggatcagcaaaggcagatgaccctg
atgttgaagcaacttttgacagagattcttttacgtgatggtggtatatctcttttgctt
ggctcaagaggtgctggagaaggtcagttgggaagatttttgactgatggacagaaaaga
caagagtttttgttcgaagctgcccgacaatgtcaggatgctggtttatatgataaatct
atagagattcaaaaaagaattggggcattttctgctgcgctggatacaataaacaagtgt
ctatctgaagctctttgtgccttatcacgcggcacactggatggtgaaagccggattact
ggacttatacattctggaaatgatatcttggaaacattcaagtactacccagaaatcagt
cctcaagagagagccactgcaattgagcaacaaaacgtgctgaggcagcttgaagcaatc
ttagccatccataaacttgcgaggtctgggaataagctagatgcattgagggagattgca
agacttccatttcttccactggacccaagatctacagattccacacctgatgccttccaa
aacgtgtcacctcatgttgaagcctgtgtaccaggccttctcaaagacgctcttaattgt
ttggacaacgtcgctgatacagatggatctctccgtgctatgaaagctaagatcgccaac
tttcttgccaacaaccttaatcggagctggcctcgtgatttgtatgaaaagattgctcga
agcttgtga
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