Salvia splendens (scarlet sage): 121769552
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Entry
121769552 CDS
T07627
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04120
Ubiquitin mediated proteolysis
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121769552
04120 Ubiquitin mediated proteolysis
121769552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121769552
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121769552
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121769552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_11
zf-RING_5
zf_RING_Vps8
zf-HC5HC2H
Prok-RING_4
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
121769552
NCBI-ProteinID:
XP_042022333
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All DBs
Position
15:9127421..9131382
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AA seq
493 aa
AA seq
DB search
MMRLQTYGGISLIATLAVIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVVMCILWQL
TKKIFLGKLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFIVMVTALLLIKALHWLA
QKRVEYIETTPSVPKLAHIRIVSFMGFLLLLDCSFLYNSIKYILETKQASVSLFFAFEYM
ILATTTVSTFLKYIFYVSDMLMDGQWEKKAVYTFYLELARDLLHLTMYMCFFLVIFVNYG
VPLHLIRELYETFRNFKIRIADYLRYRKITSNMNDRFPDATSEEINSSDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQNTCPTCRAPVVPPEHGMSTTGTRSGGQQQGTSATGTS
SQGSVSSGEANGNISQHQARLQAAASAASMYQTSFVYPSPSTLAWSPGHTVPPQPFGPSG
PNMTANDSASASQQDIKVKLIERQIEYLQWQLQHLQESGSEKKTGAGASDIKGKAVSSPS
SSSIVDSSETGNP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacttatggagggattagtttaatagctacactggctgttatctat
catgcatttagtagcagaggccagttttatccggcaatggtgtacctttctacttcaaag
atcagtttggtgctacttttaaatatgggcctggtagttatgtgcattttgtggcaatta
acaaagaagatcttccttggcaagttacgagaagcagaagtggaaaggctgaatgagcag
tcatggcgggaagtcatggaaatactatttgccataactatttttagacaagatttttcg
gtttcatttatagtgatggttactgctttacttttgatcaaagctttgcattggttggcc
cagaagagagttgaatacattgaaacgactccatctgttcctaagctagctcatatccga
attgtatctttcatgggattccttctccttcttgattgtagctttctctacaactcaatc
aagtatatcttggaaaccaaacaggcttcagtttcacttttctttgcattcgagtacatg
atactggccacaacaactgtatcaacatttttgaaatatatattctatgtcagtgacatg
cttatggatggacaatgggagaagaaggctgtttacaccttttacttggagcttgctcga
gacttgcttcacttgactatgtacatgtgtttcttcctcgtcatttttgtgaactatggt
gtgcctcttcacttgatacgggaactgtatgagactttccgtaacttcaaaatccgtatt
gctgactatctacgctatcggaagattacttcaaatatgaatgatcgtttccctgatgca
acatctgaagagatcaactcgagtgatgcaacctgcattatttgccgagaggagatgact
actgcaaagaaacttctatgtgggcatctctttcatgtccactgcctcaggtcatggtta
gaaagacaaaatacatgccctacatgcagagcacctgttgtaccacctgaacatgggatg
agtactactggaacgaggtctggtggtcaacaacaaggaactagcgctactggtacatca
tctcaaggctctgtcagttctggtgaggcaaatggtaatatcagtcagcatcaggctaga
ctccaagctgctgcttctgctgcatctatgtatcagacgtcttttgtgtatccttctcca
agtactctagcatggtcgcctggacataccgtacctcctcaaccatttggaccttccggc
cccaatatgacagctaatgatagtgcatcagcctctcaacaggatataaaagtaaaatta
attgagcgccagattgagtatctacaatggcagctccagcacctacaagaatcaggcagt
gagaagaaaacgggcgcaggagcatcagatattaaagggaaggcagtatcatcaccatct
tcatcgtctattgtagactctagtgagacgggcaacccatag
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