Salvia splendens (scarlet sage): 121769778
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Entry
121769778 CDS
T07627
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121769778
03036 Chromosome and associated proteins [BR:
sspl03036
]
121769778
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121769778
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121769778
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121769778
microRNA pathway
RISC loading complex
121769778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
DUF6429
Motif
Other DBs
NCBI-GeneID:
121769778
NCBI-ProteinID:
XP_042022470
LinkDB
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Position
16:complement(2828831..2832504)
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AA seq
938 aa
AA seq
DB search
MDGDRLSRGGGDQRPSGQQLRPAAEAPQTKYRPPHLRIPQSSNAGGEHQSPPLQRQGVGR
SSESAPALTPQRTSILPIQRQPLWSAPPQQSENRILPVRRPESRSIAGRSVNLLVNHFLV
KFNPRNTIYHYSLDIRQLVSYEKRPARRLRNTGGLRLILNKLFLDDQARFPANRTAYDGE
KNLYSAVSLPTGQFRVELSAEDLSTQTYVVSIKIMNELKLSKLEDYLSGKVPYVPRDILQ
GMDMVMKENPSRYRISIDRYFYPSSFRVEDDIGGGMAAYRGFQSTLRPTAQGLALCLDCS
VMSCRKPLPVVEFLKEHIPEFDGAFLDLHLRRRVAHALKGLTVRVTHRRTKQQFTIAGLT
EKITRDLWFDFVDPKGQDPTVKVSLVQYFREKYGKVIVYQDIPCLILGRNNRTNHVPMEF
CILTEGQRYRRELLDESRQEKMKEKCLPRPPERRNTISEMMQDHDGPCGDVTRNFGFQVE
KNMTSVEGRIIGPPDLKLGAVDVVRVEDEKRQWNLAENSVVEGKRIDRWALIDFSFLDFP
KLRAKDFISNLRNRSKSLGIVMEEPLLCHSTGMRDFSSVSRLEELLRNVVHEGNRKCWNK
LQIIICVMAEKHHGYKYLKWVSETRVGVVTQCCLSNHANRGDDQFLGNLCLKINAKLGGS
NVELTRRLPHFEEEDHVMFVGADVNHPLSKKSTTPSIAAVVATVNWPAVNRYAARVSPQD
HRTEKILDLGPICRDLVNTYHQLNGIKPKKIVVFRDGVSEGQFDMVLNEELSALKRAVFD
YHYQPRITLVVAQKRHKTRLFLENLGDGSATGNVPPGTVVDTKIVHPFEFDFYLCSHYGR
IGTSKAVRYCVLWDENSFSSDQLQELIYNLCFTFARSTRPVSLVPPVYYADLVAYRGRLF
QEAAKEFQSHSVPASRPRTFDLSFYQLHPDLRNIMFFV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgatcgcctcagtcgcggcggcggcgatcagagaccgagcggccaacaactc
cggccggcggcagaggcgccgcaaacaaaatacagaccaccgcacctccggatcccgcag
tctagcaatgccgggggtgagcatcagtcgccgccgcttcaacggcagggtgtgggccgg
tctagcgagagcgctcctgctctcactccccagcgaacttctatacttcctatacaacgg
cagcccttgtggagcgcaccaccacaacaatccgagaacagaattttacctgttaggcgg
ccggagagcaggtccattgccggaagatcagtcaacctactagtaaaccattttcttgtc
aaattcaacccaaggaataccatataccattatagtttggatatcagacaattagtatcg
tatgaaaaaagaccggcaagaaggttgaggaacacgggtggacttcgtttgatactgaac
aaactcttcctcgatgatcaagcgcggtttccagctaatcggactgcttatgatggtgaa
aagaatctctacagtgcagtttcgctacccactggccaattcagagtggagctatcggct
gaagacttgtctactcagacatacgtagtttcgatcaagataatgaatgagctgaagctt
tccaagctggaagactatttgagtggtaaggtgccttatgtgcctcgtgacatactgcaa
gggatggatatggtaatgaaggagaatccttcgaggtataggatctccattgatagatac
ttttacccttccagtttcagggtcgaagatgatattgggggtggtatggcagcatataga
ggcttccaatcaactttgcggcctactgcccagggccttgcattgtgcttggactgctcg
gttatgtcatgccgcaagccgttgccagttgtagagttcctcaaggagcatatacctgaa
tttgatggagcatttcttgatttgcacttgaggcggagggttgcacatgctttgaaaggg
ttgacagttagagtaactcatcgtcgtaccaagcagcagttcactatagctgggttgact
gaaaaaattacccgtgatctttggtttgattttgttgatcccaaaggacaggatcctact
gtcaaagtcagtcttgtgcaatatttcagggagaaatatgggaaggtgattgtttaccag
gatatcccttgcttgattctcggcagaaataatcgtacaaatcatgttccgatggaattc
tgcatcttaactgaggggcaacggtacagaagagagcttttggatgaatcccgacaggag
aaaatgaaagaaaaatgtttgcctcggccaccagaaaggagaaacacaatcagtgagatg
atgcaagatcatgatggaccctgtggagatgtcactcgaaattttggatttcaagttgag
aagaatatgacatctgtagaaggtcggataattggcccaccagatttgaagcttggtgcc
gttgatgtagtaagagttgaagacgagaaacgccaatggaacctggctgagaattctgtt
gtggaaggaaaacgaattgatagatgggccttgattgatttcagctttcttgattttcca
aagctcagagcaaaggatttcatcagcaatctgagaaatcgatccaagagtttaggaatc
gtcatggaagagcctttgctctgccattcaaccggcatgcgcgacttctcttcagtgagc
agactggaagagcttctcagaaatgttgttcatgaaggcaacagaaaatgttggaacaaa
ttgcagataataatttgtgtcatggctgagaaacaccatggatacaaataccttaaatgg
gtatctgagacgcgagtaggcgttgtaactcagtgttgcttgtccaaccatgcgaacaga
ggagatgaccagtttcttgggaacctctgcctcaagataaacgcaaagcttggaggaagc
aacgtggagctcactcgaagacttcctcatttcgaagaggaagatcatgttatgttcgtt
ggtgctgatgttaatcatccactctcaaagaaatcgaccactccatctatagctgccgtc
gtcgccacagttaactggcctgctgtgaatcgctacgccgcacgagtttcgcctcaagac
cacagaaccgagaagattctggacttggggcccatttgcagggatctcgtcaacacgtac
caccagctcaacgggattaaacccaagaaaatcgttgtttttcgcgacggagtgagcgag
gggcagtttgatatggtgctgaacgaggagctatccgccttgaagagggccgtatttgac
tatcattaccagccaagaatcaccctcgtcgtggctcagaagagacacaaaacgcgcctc
tttctcgagaatctcggggacggaagcgccacggggaatgtgcctcccgggacggttgtt
gacacgaagatcgttcacccgttcgagttcgacttctacctctgcagccactacgggcgg
attgggacgagcaaggccgtacggtactgcgtgctgtgggacgagaactccttctcgtcc
gaccaactgcaggagcttatatacaacctgtgcttcacgttcgcgcggagcacgaggccg
gtgtcgctcgtccctccggtgtactacgcggacctcgtagcctaccgcgggcgtctgttt
caagaagcggcaaaggagttccaatctcattccgttccggcttcgaggcctcgcactttc
gatctaagtttctatcaactccaccctgatcttcggaacatcatgtttttcgtttga
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