Salvia splendens (scarlet sage): 121769785
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Entry
121769785 CDS
T07627
Name
(RefSeq) KH domain-containing protein HEN4-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121769785
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121769785
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Secretin_N
DUF1411
Motif
Other DBs
NCBI-GeneID:
121769785
NCBI-ProteinID:
XP_042022475
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Position
16:22652951..22657293
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AA seq
639 aa
AA seq
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MEETPLTTPATPFPPQKIPKSGPKPPPAGHRSSATAKQIHPDAAYRLLCHVNTAGGVIGN
SGSIIKQLETLTGSRIRFEEGLPNCHERVVNIVGDGALERRISVGGGEGEDTVSVSTAQE
GLIRVFERVLEVEGSAGKNDNGGDDNEHRNSYNSNGLIVCRLLAPTVQIGALMGKGGKIV
AAIRKSTGAKIRVFKKEQVPPCAAPEEELIQIVGGLLAVKKALLAVSRRLQDRILGEGAP
GHISTHGASQKSYSDFSVKNNTSAPPVSDIAVEHCSFDHSLSADTEKYLNVDDKSSLKKV
IFRFLCSSGIAGGVIGKGANIVKYLEKETGASIKFASPVSGSRERLAIISSLESPIPLYS
PAQIAIVRVFSRCVEVALDQGVIVSFGHGESVSARILVSSSQLSSILDGDGKLATDISLA
SGAEIQLMGADLPDFAGVGDNVVQISGDYENVKSALFQLAGRLRANFFSRIGYKGVGSRH
SLYPTVSSSIPTGGEAAFSTQSAQLSRFSHIDELDHLGFVQKSSSSWLPGLQWEQANNIE
SQPRPVDGSKETFRSGFKRESIIVNEGSEQKVEVVVPREKFGSVYGDDGSNLTRLREISS
AVVTVVDPSPGEGSGKVIISGTPECIRIAQSLLQAFISF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacgcctctcacgactcccgcgacgccctttccccctcagaaaatccccaaa
tccgggcccaagccgccgccggccggccaccggagctccgccaccgctaagcagatccat
cccgacgcggcgtaccgcctcctgtgccacgtgaacaccgccggcggcgtgattgggaac
tccggctccataatcaagcagctggaaaccctaaccggctcgaggattcgcttcgaggag
gggctccccaattgccacgagcgcgtggtgaacatcgtcggcgatggcgcgttggagagg
aggatttccgtaggcgggggcgagggcgaggatacggtgagcgtctcgacggcgcaggag
ggtttgattagggtttttgagagggttttggaggtggaagggagtgctgggaaaaatgac
aacggaggagacgataatgagcatcgcaacagctataatagtaatgggttgattgtttgc
cggttgctcgctccgaccgttcagatcggagcgctgatggggaaggggggcaaaattgtt
gccgccattcgcaaaagcacgggggcgaaaattcgtgttttcaagaaggagcaggttccc
ccttgcgctgcaccggaagaggagctgattcagattgtgggtggacttctcgctgttaag
aaagcactgcttgctgtttctcgtcgtctccaggatagaatccttggtgaaggagctcct
ggccatatatccactcatggggcatcacaaaaatcgtactcagatttcagtgtgaaaaat
aatacttccgcgccgcctgtttctgatattgctgttgagcattgttcttttgaccattct
ttgtcagcagacactgaaaagtatctaaatgtagatgataaaagctctctgaagaaagtc
atcttccgatttctttgctctagcggaattgctggcggtgtcattggaaagggtgccaac
atcgtcaaatatttggaaaaagaaactggagcttctataaagtttgcatctccagtgtcg
gggtcaagggaacgccttgccatcatctcttctttggagagtccaattccgttgtattct
cctgcacaaatcgctattgtccgtgttttttccagatgcgtagaagttgccctggaccaa
ggggtgatagtgagcttcggccatggggagagtgtatcagcaagaattctcgtttcatcg
agccagcttagcagtatactggatggggatggaaagcttgctacagatataagtcttgca
tcaggtgctgagatacaactaatgggagcagatcttccagattttgctggagttggcgat
aacgtggtccagatttcaggtgattatgaaaacgttaagagtgctctatttcaacttgct
gggaggcttcgggcgaatttcttttctagaataggatacaaaggagtaggaagcagacat
agtttgtacccaactgtttccagcagcattcctactggtggagaggcagctttttcaaca
caatctgcacaactgtctcgattttcccatattgatgaattggaccaccttggattcgtg
cagaaatcaagcagctcttggctaccaggattgcagtgggaacaggcaaacaacatagag
agtcaaccaagacctgtagatggttcgaaagaaacttttcgtagtgggttcaagcgagaa
agcattattgtgaatgagggatcagaacaaaaggtcgaagtcgtggttcccagggaaaag
tttggctctgtttatggtgacgacggaagcaacctgactcgtttaagagagatatcaagt
gcagtcgtgacagtggtagatcccagccccggggaaggcagtggtaaggtgatcatatca
gggacacccgaatgcatccggatcgctcagagcctacttcaagcgttcatttcattttga
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