Salvia splendens (scarlet sage): 121770023
Help
Entry
121770023 CDS
T07627
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121770023
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
121770023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
NAD-bd_HRPKS_sdrA
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
121770023
NCBI-ProteinID:
XP_042022749
LinkDB
All DBs
Position
16:4439964..4447362
Genome browser
AA seq
550 aa
AA seq
DB search
MAGHRSNYGKRPHSQSDYSESGGNKRRNSGSGDKDAYSIGQDDTVYRYLCPGKKIGSIIG
RGGEIVKQLRLDTNSKIRIGESIPGSEERVVTIYSASEETNDLEGRDGPVCPAEDALFKV
HDRIVAEDSAAEDSDDPPHVTVRLLVPSDQIGCIIGKGGQIVQNIRSETGAQVRIVKDDH
LPTCALSSDELVQISGDASVVKKALHQIASRLHDNPSRSQHLLSSANHTVYPSNSSVMGA
SAGPPIMGLAPLMGHYGGYKGESADWSRSMYSAPRTETSPKEFSLRLVCPTANIGGVIGK
GGMIINQIRQDSGAGIKVDSAASDGDERVISITAKEVFEDSFSPAIDAALRLQPRCSEKV
ERDSGLVSFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVACEDDEM
VQVSGDLDVAKDALIQVTSRLRANLFEKEGAVSTFLPVLPYLPMSADGPESYKYESRDSK
SRGRGGYSYSGGYGAGDLPPVDSYGGHGGFQSGSASSPYGAYGGSYSSGRSVGSGLSGRN
HASRGRNYDY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcatcggagtaattatggcaagcggccacattcgcagtctgactactctgaa
agcgggggaaataaaagaagaaattctggaagtggtgataaagacgcatactctattgga
caagatgatacagtgtatcgctatttgtgccctggaaagaagatcggaagtattattgga
aggggcggggaaattgtcaagcaactgaggttggatactaattccaaaattcgaattggg
gaatctatacccggaagcgaagaacgtgttgttactatatatagtgctagtgaggaaacc
aatgatttggaaggccgtgatgggccagtttgccctgctgaagatgctctcttcaaggtg
catgatagaattgttgccgaggattctgctgcagaggactcggatgacccccctcatgtt
actgtccgacttctagtgccatccgatcagattgggtgtattattggaaagggtggacag
atagttcaaaacattcgtagtgaaactggggcacaggttcgcattgtaaaggatgaccat
ttgccaacatgcgctctgagttcagacgaacttgtgcagatatccggcgatgcgtctgtg
gtgaagaaagctcttcatcagattgcatctcggcttcatgacaacccctcacgatctcaa
catctgctctcttcagctaatcatactgtctacccgtctaatagttcagttatgggggcg
tcagctggtcctccaataatgggattggcaccactaatggggcactatgggggatacaag
ggcgagagtgcagactggtcccgatctatgtactcagctccaaggacagaaacatcgcca
aaagaattctcacttcgtttggtgtgcccaactgctaatattggaggtgtcattggcaag
ggtggtatgataattaatcaaataaggcaggattctggggcaggtattaaagttgatagt
gcagcctccgacggagatgaacgcgtgatatccataactgccaaagaggtctttgaagat
tccttttctccagcaattgatgcagctttgcgattacagcccaggtgcagtgagaaagtt
gaaagagactctggtcttgtttcatttacaacacgattacttgttcctacttctcgaatt
ggatgtcttattgggaaaggagggtccattatatcagagatgaggaaagtcaccaaggcc
aatattcgtatactatcaaaagaaaatctccctaaagttgcctgtgaggatgatgagatg
gtgcaggtttccggagaccttgatgtagccaaggatgctctcatacaagtaacttcacgc
ttgagggctaatctgtttgaaaaggagggtgctgtctctacattcttgcctgtcctccca
tatcttcctatgtccgcagatggtccagagagttataaatatgaaagtagagattcaaag
agccgtgggcgtgggggttattcttactctggtggatatggtgcaggggatctgccacct
gtggatagctatggcggtcacggtggttttcagagtggtagtgccagctctccttatggt
gcttatggtgggagctattcatccgggcgctctgttggttctgggttgtcagggcgtaat
catgcttcacgcgggaggaactatgactactag
DBGET
integrated database retrieval system
