Salvia splendens (scarlet sage): 121770071
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Entry
121770071 CDS
T07627
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121770071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121770071
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121770071
Membrane trafficking [BR:
sspl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121770071
Atg1 complex
121770071
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121770071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
YqeH-like_C
Motif
Other DBs
NCBI-GeneID:
121770071
NCBI-ProteinID:
XP_042022799
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All DBs
Position
16:18420087..18424384
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AA seq
620 aa
AA seq
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MASYHGNTHSERAKMEQIITEFFAKSLHIILESRCPYVSSRNYSGEQVLSSLSPSSSSSS
SSSFRPRDKWFNLALRDCPAALENIDFWRQSNLEPMIVDVILMQRPIDWDPLNFSPKTGF
VSGKERHYYGSDNEEFGCEGRNERIIERWVLQYESKKNGGSTGSKKRSNCTSSHALYKKS
ILLLRSLYATVRLLPAYKLFRDLTSSAHIRMYNLAHRVLSFVEPFTRREEADMQRFVFTP
VDASCGRLCLSVLYRSSVVDMGSDPSTPLSPQFIPEYVGSPMAEPLKRFPSGFVSQSSPS
SSPFGRRHSWSYDLYRASQPSANPSPSPSPTYSDSHASLAKQRCRRLPPPSLPHHLPDET
LIAYMKTPSYDEYWPSPVFSPSPSPSPPTYVPNSHTSKALLRCESAPVSIPVTKLSSMPS
LPNKQLMPPSPPLKATLLTAAENIAHVRPTSTADKLLSFSKDKPHQISGARPSVNSSPSK
SFSSRLSFQDDYDDGPFVVEDDEILYPSSRSGLFELPGHPNEPGGTLFVKRSQDAAVGAL
VRMLKKAPPLHQDLQGSTLQTPTNSIKDTTEISEEPRVQQSSASNIVSSGLGLVTSKTTA
NALEELHGYRKMKDSFLKLK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatcacggcaacactcattcggagcgagccaaaatggaacagattatcact
gagtttttcgccaaaagccttcacataatactcgaatcgcgctgcccttacgtctcgtct
cgcaattacagcggggagcaggttttgtcctcgctgtctccctcctcttcttcctcgtct
tcttccagttttaggcctcgggataagtggtttaatttagcgcttagggattgccctgct
gccttagagaacatagacttttggcgccagagcaaccttgaacctatgattgttgatgtt
atactaatgcagaggcctattgattgggatcctttgaatttctccccgaaaacggggttt
gtgtcggggaaggagaggcactactatggctcggataatgaggagtttgggtgtgaaggg
aggaatgagaggattattgagcgatgggttttgcaatatgagagtaagaagaatggtggg
tcgactgggagtaagaagaggtcgaattgtacgagctctcatgctttgtacaagaagtct
atactgttgttgaggtctctgtatgccacagttaggcttttgcccgcttataagctgttc
cgggatctcacttcatcggctcatattaggatgtataatctcgctcatcgggttttgtct
tttgttgagccgttcacccgcagagaagaggcggatatgcagcgatttgtgtttactccg
gttgacgcttcttgtggcaggctttgcctctcagtcttgtatcggtcgtctgtagtggat
atgggttcggatccttcaactcctctatcaccgcagttcattccggaatatgttgggagt
cccatggcggaaccactgaaaaggtttccttctggttttgtatcacagagctccccatct
tcgtctccatttggaaggaggcatagttggagttatgacttgtatcgagcatcacaacct
tcagctaacccctcgccttcaccttcgccaacgtactccgattcccatgcctctttagca
aaacagcgctgccgtcgtctcccaccaccatccttgcctcatcatttacctgatgaaaca
cttatcgcttatatgaagactccaagttatgatgagtattggccttcccctgtgttttca
ccatctccatctccatcgccacccacctatgttcccaatagtcatacatctaaagctctt
ttgcggtgtgaaagtgctcctgttagcatacctgtgacaaaactttctagcatgccttca
ctgccaaacaaacaactgatgccgccttcacctcccctgaaagctactctgctaacagct
gctgagaacattgcacatgtgaggccaacctcaacagctgacaagttactctcgttcagc
aaggataaaccacaccagatatctggggcaagaccatctgtgaatagctcaccatctaaa
tcattttccagtaggttatcatttcaggatgattatgatgatggaccatttgttgtcgag
gatgatgaaatactctatccaagttccaggtcaggtttgtttgagctgccaggacatccg
aatgagcctgggggtactttatttgttaaaagatcacaagatgctgctgtcggggctctt
gttcgtatgctgaagaaagcacctcctcttcaccaagatctacagggctccacgcttcag
acaccgaccaacagtatcaaggacactactgaaatatctgaagagccaagagtccagcag
tcttctgcttcaaacattgtgtcatctgggcttggactcgtgacatccaagactacagct
aatgctctggaggagctccatggctaccgaaaaatgaaagattcgtttcttaaattgaag
taa
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