Salvia splendens (scarlet sage): 121770367
Help
Entry
121770367 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121770367
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121770367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
121770367
NCBI-ProteinID:
XP_042023041
LinkDB
All DBs
Position
16:22631696..22634549
Genome browser
AA seq
563 aa
AA seq
DB search
MEPQPLLLACTEFKIIAQTNDQIEVSFTMKWNPSVGRNVVPLNIDKRYIVLRGSSGFYAY
AIFEHLAGWPALNIDRARLAFKLDKKRFRYMAISDERQRIMPTEDDRKFGKVLAYKEAVL
LTNPSNPSLKGEVDDKYQYSCDNKDSHVHGWISSGPHVGFWVITPSDEFRAGGPLKPDLT
SHVGPTSLSIFFSDHYAGPSFGVFLQNKEPWKKVYGPIFIYLNSDAATQPTTLWQDAKRQ
AANEIAKWPYEFPLSPEFPHSKERGSVRGRLLVHDGGPAKPARSAYVVLARPGAAGSWQD
NYKGYQFWTKAGQDGSFTITGVRAGIYNLYASVPGIIGDFKHNVYIIIKPGSVIQIGDLV
YNAPRNGPTLWEIGIPDRTGSEFYVPDPAPGLINKLYLKSTQKFRQYGLWERYTDLYPKN
DLIYTVGASNYARDWFFAHVTRKTANNVYVPTTWQIKFYLKTVSRGSYTLRIALAAAHNA
QLQVWINEANAGVKPHFTTGRIGRENAIARHGIHARYWLFSVNVPGSQLVTNRINTIYIK
QVNAGTPFPGVIYDYIRLEAPST
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcagccgctcctgctagcatgtacggaattcaagattatagcacaaacaaat
gatcaaattgaagtttctttcaccatgaaatggaacccctcggtcggccgaaatgtcgtc
cctctcaacatagacaagaggtatatagtgctgcgtggaagctctggcttctacgcatat
gcaatattcgagcatttggcaggatggcctgctcttaacatcgaccgagcaagactcgcg
ttcaagctcgacaagaaaagatttcgttacatggcgatctcggatgagaggcagaggatt
atgcctacagaagatgacaggaaatttgggaaggttcttgcttataaggaagcagtttta
ctaacaaatccaagcaacccttcattgaaaggagaggtggacgacaagtatcagtactcg
tgcgacaacaaagatagtcatgtgcacgggtggattagctctggtccccatgtgggattc
tgggtcataacgccgagtgacgagttccgtgctggaggtcccctcaaaccggatcttact
tctcatgttggcccgacttccttatctatattctttagcgaccactatgctggcccgagc
tttggagtgttcttacaaaacaaggagccatggaaaaaagtgtacggccctattttcata
tatcttaattcagatgcggcaactcaaccgactactctatggcaagatgcgaagagacag
gcggcaaatgagatcgcgaaatggccatatgaattcccattatcaccggaatttcctcac
tccaaggaacgaggctcggtccgtggaaggctcttggtgcatgatggcggtcccgcaaag
ccagcaagatcagcatatgttgtcttggcccgtcccggggctgcgggatcatggcaggat
aattataagggctatcaattctggacaaaggccggtcaagatgggagcttcacaataaca
ggtgttcgagcaggcatttataacttgtacgcttcggttccagggatcatcggagacttc
aaacacaacgtttatattataatcaaaccaggtagtgtgattcaaataggtgatcttgtg
tacaatgctccaagaaacggaccgactttgtgggaaatcgggatccctgatcgaaccgga
tcagagttctacgtccctgatcccgcccccggtctcatcaacaagctatacctcaaatcc
acacaaaagttcagacagtatggcttatgggagagatacacagatttgtaccccaaaaat
gatctaatctacacggttggtgccagtaattacgcaagagattggttcttcgcccatgtc
actaggaaaactgccaacaatgtctacgtaccaacgacgtggcaaatcaagttctacctg
aaaaccgtgagcagaggaagttacacattgaggattgcacttgcggctgcgcacaatgct
caactacaagtgtggatcaacgaggcgaatgcaggtgttaagcctcatttcacgacgggg
aggatagggagggagaatgcaatagcaaggcatgggattcacgcgagatattggctcttc
agtgtgaacgtgccgggatcacagcttgtgacgaaccgaatcaacacaatatatatcaaa
caagtcaatgctggaactccttttccgggtgttatctacgattatatccgcttggaagcg
ccatctacttga
DBGET
integrated database retrieval system
