Salvia splendens (scarlet sage): 121770369
Help
Entry
121770369 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121770369
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121770369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
EMC7_beta-sandw
CarboxypepD_reg
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
121770369
NCBI-ProteinID:
XP_042023043
LinkDB
All DBs
Position
16:complement(22766432..22797109)
Genome browser
AA seq
671 aa
AA seq
DB search
MSLKAKFDCLSTGLEIDVGPRGNPNVKWTSSSSRDRLLQSNVTASSPLQLRVSPGIVEID
NGIVKLSLLNPSGQIAGVSYNGIANILEPEFKDSQRGYWDIGWDAPGIGKNVIDPLACTE
FKIIAQTNDQIEVSFTMKWNPSVGRNVVPLNIDKRYIVLRGSSGFYAYAIFEHLAGWPAL
NIDRARLAFKLDKKRFRYMAISDERQRIMPTEDDRKFGKVLAYKEAVLLTNPSNPSLKGE
VDDKYQYSCDNKDSHVHGWISSGPHVGFWVITPSDEFRAGGPLKPDLTSHVGPTSLSIFF
SDHYAGPSFGVFLQNKEPWKKVYGPIFIYLNSDAATQPTTLWQDAKRQAANEIAKWPYEF
PLSPEFPHSKERGSVRGRLLVHDGGPAKPARSAYVVLARPGAAGSWQDNYKGYQFWTKAG
QDGSFTITGVRAGIYNLYASVPGIIGDFKHNVYIIIKPGSVIQIGDLVYNAPRNGPTLWE
IGIPDRTGSEFYVPDPAPGLINKLYLKSTQKFRQYGLWERYTDLYPKNDLIYTVGASNYA
RDWFFAHVTRKTANNVYVPTTWQIKFYLKTVSRGSYTLRIALAAAHNAQLQVWINEANAG
VKPHFTTGRIGRENAIARHGIHARYWLFSVNVPGSQLVTNRINTIYIKQVNAGTPFPGVI
YDYIRLEAPST
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgaaggcaaagttcgattgtttgtccacgggccttgagatcgatgtagggcct
cgtgggaaccccaacgtcaagtggacgtcttcctcgtctagagacaggctgcttcaaagc
aatgtaaccgcatcttctccactccaactgcgtgtctcgcctggcattgtggagatagac
aacggcattgttaagctcagtctgctaaatccgtcgggccagatcgccggcgtgtcgtat
aacggcatcgccaacatcctcgaacctgagtttaaagattcacaaagagggtattgggat
atagggtgggatgcgccagggataggcaaaaatgttatcgacccgctggcatgtacggaa
ttcaagattatagcacaaacaaatgatcaaattgaagtttctttcaccatgaaatggaac
ccctcggtcggccgaaatgtcgtccctctcaacatagacaagaggtatatagtgctgcgt
ggaagctctggcttctacgcatatgcaatattcgagcatttggcaggatggcctgctctt
aacatcgaccgagcaagactcgcgttcaagctcgacaagaaaagatttcgttacatggcg
atctcggatgagaggcagaggattatgcctacagaagatgacaggaaatttgggaaggtt
cttgcttataaggaagcagttttactaacaaatccaagcaacccttcattgaaaggagag
gtggacgacaagtatcagtactcgtgcgacaacaaagatagtcatgtgcacgggtggatt
agctctggtccccatgtgggattctgggtcataacaccgagtgacgagttccgtgctgga
ggtcccctcaaaccggatcttacttctcatgttggcccgacttccttatctatattcttt
agcgaccactatgctggcccgagctttggagtgttcttacaaaacaaggagccatggaaa
aaagtgtacggccctattttcatatatcttaattcagatgcggcaactcaaccgactact
ctatggcaagatgcgaagagacaggcggcaaatgagatcgcgaaatggccatatgaattc
ccattatcaccggaatttcctcactccaaggaacgaggctcggtccgtggaaggctcttg
gtgcatgatggcggtcccgcaaagccagcaagatcagcatatgttgtcttggcccgtccc
ggggctgcgggatcatggcaggataattataagggctatcaattctggacaaaggccggt
caagatgggagcttcacaataacaggtgttcgagcaggcatttataacttgtacgcttcg
gttccagggatcatcggagacttcaaacacaacgtttatattataatcaaaccaggtagt
gtgattcaaataggtgatcttgtgtacaatgctccaagaaacggaccgactttgtgggaa
atcgggatccctgatcgaaccggatcagagttctacgtccctgatcccgcccccggtctc
atcaacaagctatacctcaaatccacacaaaagttcagacagtatggcttatgggagaga
tacacagatttgtaccccaaaaatgatctaatctacacggttggtgccagtaattacgca
agagattggttcttcgcccatgtcactaggaaaactgccaacaatgtctacgtaccaacg
acgtggcaaatcaagttctacctgaaaaccgtgagcagaggaagttacacattgaggatt
gcacttgcggctgcgcacaatgctcaactacaagtgtggatcaacgaggcgaatgcaggt
gttaagcctcatttcacgacggggaggatagggagggagaatgcaatagcaaggcatggg
attcacgcgagatattggctcttcagtgtgaacgtgccgggatcacagcttgtgacgaac
cgaatcaacacaatatatatcaaacaagtcaatgctggaactccttttccgggtgttatc
tacgattatatccgcttggaagcgccatctacttga
DBGET
integrated database retrieval system
