Salvia splendens (scarlet sage): 121770379
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Entry
121770379 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121770379
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121770379
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
121770379
NCBI-ProteinID:
XP_042023050
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Position
16:complement(23087741..23092916)
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AA seq
673 aa
AA seq
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MANLPQRDRWDFIIWRLALVGHLFFSLASQDFNRPMSFEENIEAVLPSNGVLMVKNDQHV
VLTNGLVNLTLSTPDGMVTSVTYKGSANLLDTKNKEDNRGYWDVVWNKPGNKTIMDKFPG
TSYKIVMQSKDQTEISFTSTWAVGSSGVPLNIDKRYVMLRDSPGFYTYTVLERLKEWPAF
LIQEGRIVFKLQEDKFHYTAMSDERQRVMPTPEDRSNGKPLAYPEAVLLTNPSNPQFKGE
VDDKYLYSCDNKDNKVHGWVSSDLGLGFWMITPSNEFKTGGPFKQDLTSHVGPTLLSMFM
STHYVGEDIAIKLEAGEYWKKVLGPVYVYLNSDTKAKTKPSILWNDAKQRMKEEVASWPY
TFPLSTDFVKSEERGAVSGQLFVRDRYKHKEPLGGASAFVGLGPPGPAGSWQLENKGYQF
WTEADEKGNFLIKNVIPGTYSLFASIPGIIGDYKHASSIVVSPGSNVVVSDVVFDAPRNG
PTLWEIGIPDRSAAEFFIPDPSPQFKIHPYPRPVEKFRQYALWTRYKDYYPHSDLVYTIG
RSNYSIDWFFVHSTKNVEGDVYEATTWKIQFDLKDVRKEANYTLQIALASANGAELQVHV
NNPNSKAQFSTGMIGRDNALARHGIHGLYHLYSIGIEGTLLVDGNNTLFLSQTRNIGPFR
ELMYDYIRLEGPA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggctaatctgcctcagagagatagatgggacttcattatttggaggcttgcgcttgtt
gggcacctattcttttcacttgcttcacaagatttcaatcggccaatgagtttcgaagaa
aatattgaagctgtgttgccatccaacggagtcctcatggtgaaaaatgatcaacatgtt
gtattgactaatggattggtgaacctcacattgtccacaccagatggtatggtcactagt
gtgacatacaaagggagtgccaatttgctcgataccaaaaataaagaagataatagaggg
tattgggatgtggtttggaacaagccgggcaataaaaccataatggataagtttccagga
acaagctacaaaattgtaatgcaaagcaaagatcaaacagaaataagcttcacctcaaca
tgggctgttggaagttcaggagttcctttaaacattgataaaagatatgtaatgctacga
gattctcctggattttatacatacactgtgctagagcgattgaaggaatggccagctttt
ctaatacaggaagggcgaatcgtgttcaagctacaagaagacaaatttcattacacggcg
atgtcggatgagagacagagggttatgcccacgcctgaggatcgatctaatgggaaacct
cttgcctatccggaagctgttctcttaaccaatccatcaaatccccaatttaaaggagag
gtggacgataagtacttgtattcatgtgataacaaagataacaaggtccatggatgggtg
agcagtgatttgggccttggattttggatgattactccaagcaatgagtttaaaactggt
gggcccttcaagcaggatctcacttcacatgttggcccaactcttctttctatgtttatg
agcacacattatgttggagaggatatagctatcaagttggaggcaggggagtactggaaa
aaggttttgggcccagtttatgtttatttaaattctgatactaaagccaagactaagcct
tctattctttggaatgatgctaaacaaaggatgaaggaggaggtggcttcatggccttac
acttttccactctccacagactttgttaaatcggaggaaaggggagctgtgagtggtcaa
ttatttgtccgtgacaggtacaaacataaggagcctttgggtggggcctctgcttttgtg
ggattgggcccacctggaccagcaggctcatggcagttagaaaataagggttaccaattt
tggacagaagcagatgagaaagggaatttcttgatcaagaatgtgattccaggaacatac
agcttgtttgcatcaattcctggaatcattggagattacaagcatgcttccagcattgtc
gtttctcctggatccaatgttgttgtaagtgatgtggtttttgatgctccaagaaatggc
cccacactatgggagatcggaatccctgatcggtccgcagctgaattcttcattccggat
cctagtccacagttcaagatccatccctacccacgtcccgttgaaaagttcagacagtat
gcactatggacgcgatataaggattactatccccactcagacttggtctacaccattgga
cgaagcaactactccatagattggtttttcgtccactccaccaagaatgtcgaaggagat
gtttacgaagcaacgacgtggaaaatccagttcgacctaaaagatgttagaaaggaggca
aactacactctccaaatagcacttgcatcggctaatggggctgaactacaagtacatgtg
aacaatccaaactcgaaggcgcaatttagcacaggaatgataggtagagacaatgcacta
gcaagacatggaattcatggattgtaccatttgtacagcattggaatagaagggacctta
cttgtcgatggaaataatacattatttttgagtcaaacaagaaatatagggccttttaga
gaacttatgtatgattacatacgtttagaaggacctgcttga
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