Salvia splendens (scarlet sage): 121771042
Help
Entry
121771042 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121771042
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121771042
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
121771042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_Vps41
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121771042
NCBI-ProteinID:
XP_042023776
LinkDB
All DBs
Position
2:37713153..37714285
Genome browser
AA seq
303 aa
AA seq
DB search
MSTPFTPPATPHSPSSSSVSASIMIVIIIIASAVIISASIYLLLRLISKRFSTADDVVVS
SNRRVAPSDLLHSLPLFTFRSVARNLNSGGGDCAVCLSKFEARDQLRLLPLCCHAFHAAC
IDKWIASNQTCPLCRSTVFPSASDALDKILSTGNLSSGSFRVEFGSISLRRNGESAAAAE
ELPSAGAPPRTYSLGLYDYTADDYLYEVAVGCTTTHRREYSDFNSNDKDSSHAEEVSGGR
RSWLAEYVERLASMSSRTMSFRSSGRFFAGSSRRSEAAVVREDLEANRSGEEISEMFRWI
SGI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccattcacaccgccggcgacacctcactcgccatcttcttcctccgtctcc
gcctccattatgattgtcatcattatcatcgcttccgccgtcatcatctccgcctcgatc
tacctccttctccgactaatctcgaagcgcttctccaccgccgacgacgtcgtcgtctcc
tccaaccgccgcgtcgcgccgagcgatctcctccactccctccctctcttcaccttccgc
tccgtcgcgaggaacctcaacagcggcggcggcgattgcgccgtctgcctctccaaattc
gaggcgcgcgatcagctccgcctcctgccgctctgctgtcacgctttccacgccgcctgc
atagacaagtggatcgcatccaatcagacgtgtccgctctgcaggtccaccgtattcccc
tccgcctccgatgcactcgataaaatcctatccaccggcaatttgagcagcggaagcttc
cgtgttgaattcggcagcatcagtctccgccgcaacggagaatcggcggcggcggcggag
gaattaccatcggcaggagcgccgccgcggacgtactcgctagggttgtacgattacacc
gcagacgattatctatacgaggtggcggtagggtgcacaacaactcatcggagagaatat
tccgatttcaattcgaacgacaaggattcgtcgcatgcggaggaggtttccggcgggagg
aggagctggctggcggaatacgtggagagactggcgtcaatgtcgtcgcgtacgatgtcg
tttaggagctcggggaggttcttcgcggggagcagccgccgcagcgaggcggccgtggtg
cgggaggatttggaggcgaaccgctccggagaggaaataagtgaaatgtttcggtggatt
tctggaatttaa
DBGET
integrated database retrieval system
