Salvia splendens (scarlet sage): 121771065
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Entry
121771065 CDS
T07627
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121771065
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121771065
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
KH_GLD-3_3rd
Motif
Other DBs
NCBI-GeneID:
121771065
NCBI-ProteinID:
XP_042023792
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All DBs
Position
16:8944269..8945873
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AA seq
442 aa
AA seq
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MTPMMPTNYKKCILILCIMLPMVAQAKIADFDEYLQKRAAESYEESLNSFDPNPEGVTDD
FNTLVGETLIVTHNGTRRNLMNEEEGCKATNPIDRCWRCDPNWNRNRKRLAQCSAGFGHR
TTGGKKGRYYVVHDPSDDDMVDPKPGTLRHAVTRSEPLWIVFAHSMVIHLKQELIVSSHK
TIDGRGVVVHIADGAGVTLQFVQNVIIHNIWIHNIVPANGGTIRDAVDHVGLRTQSDGDA
ITVFSSSNVWIDHVSLSRATDGLIDVIEGSTAVTISNCKFNHHNDVMLLGANDQSSKDAI
MQVTVAFNRFGIGLIQRMPRARWGFVHVVNNDYSHWELYAIGGSAHPTIISQGNRFRASN
YRYTKEVTKRDYAPESEWMKWQWRSEGDLFTNGAYFRESGPPLHHTKHPLVKENMIKFRP
GSFVGRLTRTSGALRCRNYHFC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactccaatgatgccgacaaattataaaaaatgtatattaattttgtgcatcatgctg
cctatggtagctcaggctaaaattgccgacttcgacgaatatttgcaaaagagggctgca
gaatcctacgaggaatccttgaactcattcgatcccaaccctgagggcgtgaccgatgat
ttcaacacgctcgttggcgagactttgattgttacacataatggaacaaggaggaatcta
atgaatgaggaggaggggtgcaaggctaccaacccgatcgatcgctgctggcggtgcgac
ccaaactggaacaggaacaggaagaggctagcccagtgcagtgccgggttcggacaccgc
acaaccggaggcaaaaaggggagatactacgtggtgcacgacccatccgacgacgacatg
gtggacccgaagccgggcaccctgcggcacgcggtgacacggagcgagccgctgtggatc
gttttcgcccacagcatggtcatccatctcaagcaagagctaatcgtgagtagccacaag
acgatcgacgggcgtggcgtggtggtccacatagcggacggcgcgggcgtcacgctccag
ttcgtccagaacgtgatcatccacaacatctggatccacaacatagtccccgccaacggg
ggcaccatcagagacgcggtcgaccacgtcgggctacgaacgcagagcgacggcgacgcc
atcaccgtgttcagctcgagcaacgtatggatcgaccacgtgtccctctccagggccacg
gacgggctgatcgacgtgatcgagggttcgaccgcggtcacaatctcgaattgcaaattc
aaccaccacaacgacgtgatgcttcttggggcaaatgaccagagctcgaaagacgcgatc
atgcaagtgacggtggcgttcaacagattcgggatcgggctgatccagagaatgccgagg
gcgaggtgggggttcgtgcacgtcgtcaacaacgactattcccattgggagctgtacgcc
atcgggggaagcgcccacccaaccatcataagccaggggaacaggttcagagcctcaaac
taccgttacacgaaagaggtgacaaaaagagactacgcgccagagagcgagtggatgaaa
tggcaatggaggtcagagggagatctgtttaccaatggggcgtacttcagagagtcgggc
ccgccgttgcaccacaccaaacacccattggtgaaggagaatatgatcaagttcaggccg
ggatccttcgtcgggaggctcacgcgcacctccggagcgcttagatgccgcaattaccac
ttttgctag
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