Salvia splendens (scarlet sage): 121771274
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Entry
121771274 CDS
T07627
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121771274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121771274
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
121771274
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
121771274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
121771274
NCBI-ProteinID:
XP_042023988
LinkDB
All DBs
Position
16:2008500..2015209
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AA seq
737 aa
AA seq
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MVGSDSLSSLPSLSPPPAEKKQPPKQWGVTKPLSLAGPIDADIQRNKDLEKFLVDSGLYE
SAEESAKRESVLALLKQIVKDWVKELTRLRGYTDQMVEDANAVIFTFGSYRLGVHGPGAD
IDTLCIGPSYVNREEDFFFVLHNILAKMEEVSELHPVSDAHVPVMKFKLDGISIDLLYAS
ISLLVIPDDLDISNISVLYDIDEPTVRSLNGCRVADQILKLVPNVKNFRITLQCLKFWAK
RRGVYSNVMGFLGGVNWAILVARLCQFYPKANPSMLVSRFFRVYTLWRWPNPVMLSEIED
NELGFSVWDPRKNPWDRNHLMPIITPAYPCMNSSYNVSSSTLRVIAEQFQFAKEICEDIE
LNKLQWNALFEQYLFFESYKNYLQVNIVASDLDDLRSWRGWVESRLRQLTLMIERDTTGK
LQCHPYPHDYVDSSKQCAHCVFFMGLQRKQGEVIQEGQQFDIRKTVDEFRHQINSYVYWK
PGMDIYVSHVRRKQIPSYVFPEGYKRSRHTRSLSQQQVDKNSSEGSEGCRPESAERIPKR
KKGCDGSEVEGSPEKRPSISPQRQVSVSPEFICSRDSLSGSCSPLFETTKEKPSVMVESL
LVNEMAKEVVPVVTKDVKTRSNRNDLQFDDCDEEMNPNSIRMQSNQGMHCAEFSDASYIP
SSGTIQHLSSSNSMENDNEGSALDRSSEDNAQLLMYNGCENGASILGDGLRESLTKRLQW
FSNLERELGPNLLRRTL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggttggatcggatagtttgagctcattgccttctctgtcgcctccgccggcagagaaa
aagcaaccgccaaagcagtggggagtgaccaagcccttgtcgctagctgggccgattgat
gccgatattcagaggaacaaggacttggagaagtttttggttgactcggggctttacgag
agtgcggaagaatctgccaaaagggaatccgttcttgcgctacttaagcagattgtgaaa
gattgggtgaaagagcttactcggttgaggggatacaccgatcaaatggtggaagatgcc
aatgctgttatttttacttttggttcttatagacttggtgtacatggccctggtgcagac
attgatactttgtgtattggaccatcctatgttaaccgggaggaagacttcttttttgta
cttcataacattttggctaagatggaagaagtctctgaacttcatccagtatccgacgct
cacgtccctgttatgaaattcaagcttgatggaatatcaattgatcttttgtatgcaagt
atttcactcttggtcattccagatgatttggacatctcaaacatctctgtgctgtatgac
atagacgaaccaactgttcgtagtcttaatggatgccgagtagctgatcaaattctcaaa
cttgttccaaatgtcaagaacttccggattactctgcaatgcctaaagttctgggctaag
agacgtggtgtttattcaaatgtgatgggttttcttggtggtgtgaactgggcaattctc
gttgctcggttatgccagttttatccaaaagcaaatcctagcatgcttgtttctcgtttc
ttcagagtgtatacgttgtggcgctggccaaatcctgtgatgcttagtgaaattgaggat
aatgaacttgggttctctgtgtgggatcctcgtaagaatccttgggatcgaaatcatctc
atgccaatcataacccctgcctacccatgcatgaactccagttacaatgtttcatccagt
actcttcgggttattgcagaacagtttcagtttgccaaagagatctgtgaggatattgag
ctgaataagctgcagtggaatgctttatttgaacagtatttattctttgagagctataaa
aattatctacaggtcaacatcgttgcttccgatcttgatgacttgcgttcttggagaggt
tgggttgaatcccgtctgagacagctaactttgatgatagagcgggatacgactgggaag
ttacagtgtcatccttacccacatgattatgttgattcctcaaagcagtgtgctcattgt
gtctttttcatgggcttacaaaggaagcaaggggaggttattcaggaaggccaacagttt
gacatccgtaagactgttgatgaatttagacatcaaataaactcatacgtgtattggaag
cccgggatggatatatatgtttctcatgttcgtagaaagcaaataccttcttatgtgttt
ccagagggctacaaacgaagtcgacatacgagatcattgagtcagcaacaagttgataag
aattctagtgaaggtagtgagggctgcaggccagaatctgctgagaggattccaaaacga
aagaagggctgtgacggatcagaggtggagggaagtcctgagaaaagaccctccattagt
cctcagaggcaggtttcagtctcgccggaatttatttgttcgagagattcattgagtggc
agttgctctccgctgtttgaaacaacaaaggagaagccatcggtgatggtagaatctctc
cttgtgaatgaaatggcaaaagaagtagttcctgtggttacaaaggatgtgaaaaccaga
tctaatagaaatgacttgcagtttgatgattgtgatgaagagatgaatccaaactcaata
cggatgcagtcaaaccaggggatgcattgtgcagaattttctgatgctagctacatccca
agttctggcactattcaacatttgagcagcagtaatagtatggagaatgataatgaagga
tctgcactggatagatcaagcgaagataacgcacagctgcttatgtataatggatgtgag
aatggtgcttctattcttggggatggactacgagagagcctaacgaagcgcttgcaatgg
ttctcaaatctggagagggagttgggtccgaacctgttgagaagaacgttgtga
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