Salvia splendens (scarlet sage): 121771383
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Entry
121771383 CDS
T07627
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121771383
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
121771383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
Cnd1
zf-RING_2
Levi_coat
Motif
Other DBs
NCBI-GeneID:
121771383
NCBI-ProteinID:
XP_042024100
LinkDB
All DBs
Position
16:complement(4760183..4776412)
Genome browser
AA seq
1791 aa
AA seq
DB search
MSNPAGGGGFGGHHRGISLSNTVHSEVAPCLPLPSLPVFCGGRDQELRLFDNRGGASRRN
ASDADVAGRIADLLRNADVSYLNLKNEVIIQPDDYMGKLNITNDVLRHEAESLEYVSPGP
GMESTNRGNLTQSKSFEWSMPAINQAPTDSLGTTNYQQDHNSNNDIINSSRKPKVKRRTK
ADIPSAPFPDSREGQDAAVGGFCERLEDICNRAEIPSDDREETEWQSLTQSDLKALGNEI
MSIRSKNLLHIVPADTLSRMLKVLDRQIHRAEGLSIDDCEKLDAEVVSSLYCALESIHAA
LAIMAHDGMPKQIYKEEYIERILDFSRHQILDVMFACDPAYRALHKPNYNLDDEEDDEVE
DFGSSSKKRRISKSVRVRKSTTNRMSGTVNIIVQKLCTIVSYLKQLLLIERLSDSCILQL
VRTSLQTLLVDNIQLLQLKAISLIGGIYYMYTQHRTYMMDETIQILLKLPLSKRVPRTYH
LPDEEQRQIQLVTALLIQMIHHCANLPEAVRLTPGNPSLDISIDADYPSKCHEAVTESCC
LFWSRILQRYTSTKNQDASELKSMMENLVMDLLTTLNLPEYPASAPILEVLCVLLLQNAG
PKSKDISARTMAIDLLGTIAARLKHDAVVCRNEKFWIVQVLMDSENSDPSYLRDVCAICL
DSTAERSSLECQGCHRPFHLDCIGGREQDVSSRTFDCQVCLCEKQLLVLKTHCESESKDD
QKQNRISKKSSRASSSLTKQEIIQQMLLNYLQDAGSADELNLFMRWFYLCLWYKDDPASP
QKFLYFLARMKSREILRDSFSFSSLLTRDSVKKITLALGQKSSFARGFDKILQVLLASLR
ENSPVIRAKAMRAVSIIVEADPEVLGNKLVQTAVEGRFCDSAISVREAALELVGKHIASH
PDVGIKYFEKVAERIKDTGVSVRKRAIKIIKDMCTSSIDFSQSTTAFVAIISRINDEESS
IQDLVCKTFYEFWFEEPSGWQNRTFKDNSSVPLEVTKKTEQVAETLRRMSSHQPLAIVIK
RILALDFFPQSAKAAGINPVLLSSVRRRCELMCKCLLEKALQVAETNSEEGEVRMLPYIL
LLHSFCLVDPTLCAPASDPSQFIITLQPYLKSQSDNRVAAQMLESILFIIDSVLPLLRKL
PETVAEELEQDLKQMIVRHSFLTVVHACIKCLCSVGKVSGKGASVIQYLIQLFYKRLDAL
GFDNKQQVGRSLFCLGLLIRYGSPLLDMSAFNPRNMDVASNINLFKKYLQAEDFIIKVRA
LQALGYVFIACPECMLQKDVGKILEATLSTGADARLKMQSLQNMYEYLLDAESRMEKDKA
SNDDNNPSADGTSVPVAAGAGDTNICGGIVQLYWNSILARCLDANEHVRQAALKIVEIVL
RQGLVHPITCVPYLIALETDPEEANAKLSHHLLMNMNEKYPAFCESRLGDGLHLSFIFIR
TMSGDLPEMSNNKSSAKLFNNIKGKGDVGSSTFARHGVARIYKLIRGNRISRNRFMSSIV
HKFETPTCSDSVIPFLMYCAEILALLPFTLPDEPLYLIYTINRVVQVSSGAVESNIKDFL
HLLQGNVHKTNGNGMVQAAQLDSTTNPGIEINMATEGNQTLPMELPNHLYGEESCNDPNT
NPIPSRDPYTISASDFQKIQASFLAAGALQLLLKLKRHLKIVYGLDDIRCQAFSPNEPVK
PGESLGRQNIPFTISDINIDPPNTYEDVIRRYQEFKNALREDTVDYSTYSANIKRKRPPS
TSTRRGKAVRMADMDDEDGYDDEDWGNSVAMMNKSAGKRGSYMRTRQRQQL
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccgccggcggaggcggtttcgggggacaccacaggggcataagtctctcg
aacacagttcactcggaggttgcgccgtgcctgccgctgccctcgctcccagtattctgc
ggcgggcgcgatcaggaacttcgactattcgacaaccgaggcggcgcttccaggaggaat
gctagcgacgctgatgtggcgggaaggatagctgatctcctccgcaatgctgatgtatct
tacttgaatcttaaaaatgaagtaatcattcaaccagatgattacatgggcaagttaaat
ataaccaatgatgttttgagacatgaggcagaatcacttgaatatgtctctccaggtcct
ggtatggagtcaacaaatcgaggtaatttgacccaatcaaagtcctttgagtggagcatg
cctgccataaatcaagcgccaactgactcattagggacaaccaattatcagcaagatcac
aattctaataatgatattattaactcttcccgaaaaccaaaagtgaaaaggagaacaaaa
gctgacataccgtcagctccttttcctgattcccgtgagggtcaagatgcagctgtaggg
ggattttgtgaaaggttggaggacatatgtaacagagcagaaattccttctgatgacaga
gaagaaacagaatggcaatcattgacccaatctgatcttaaggctctaggcaatgaaatc
atgtcaattcgatcaaagaatttactccacatagttccagctgacactctttcaaggatg
ttaaaagttttagatcgccagattcatcgagcagaaggactttcaatagatgattgtgag
aagttggatgctgaggtggtatcatccctttattgtgctctggagtcgattcatgcagct
ttagctattatggctcatgatggcatgcctaaacagatttacaaggaagagtatattgaa
aggatcttggatttttcaagacatcaaattttggatgttatgtttgcatgtgatccagca
taccgggccctacacaaacccaattataatttggatgatgaggaagatgatgaagttgag
gattttggctcaagcagtaagaagaggcgaatttctaagagtgtaagagttagaaaatca
acaacaaaccggatgtctggtacagtaaacattattgttcagaaattgtgtaccattgtc
agttatcttaagcagctattgttgatagaacgcttatcagatagttgcattctgcaactt
gtgcgaactagtttacagactcttttggtggataatatccagcttttgcagctgaaagca
atcagtttaattggtgggatttattatatgtacactcagcatcggacatatatgatggat
gaaactattcaaatacttctaaagctgccactttctaaaagagtaccaagaacttatcat
cttccggatgaagaacaaaggcagattcagttagtcactgctctattgattcaaatgatt
catcattgtgcaaatcttcctgaagctgtgaggctaactcctggaaatccttcactggac
atttctattgatgctgattacccctctaaatgtcatgaggcagttacagagtcatgctgc
ctcttttggagtcgaattcttcagcggtatacaagcacaaaaaatcaggatgcatctgaa
ttgaagtcaatgatggaaaatcttgtgatggatttgctcactactctgaacttaccggag
tatccagcttcagctcctattctagaggttctgtgtgtattactacttcagaatgctggg
ccgaaatcaaaagatatttctgccagaacaatggccattgaccttctcggtacaattgct
gcaaggttaaaacatgatgcggtagtgtgtaggaatgaaaagttttggatagtacaggtc
ttgatggatagtgaaaatagtgaccctagctatctgagagatgtctgtgctatttgtttg
gattcaactgctgaaaggtctagtctcgaatgtcaaggctgtcataggccattccatctt
gattgtataggaggaagagagcaggatgtttcttctcgaacctttgattgtcaggtttgc
ttatgcgagaaacaacttcttgtgttaaaaacgcattgcgagtccgaatccaaggatgac
cagaaacaaaatcgtatttccaaaaaatcttcccgagcttcatcctcactaacaaaacag
gagattattcaacaaatgctcctaaattatttgcaggatgcagggtctgcagatgaacta
aacctctttatgcgctggttttatctttgcctttggtataaagatgatcctgcttctcct
caaaagttcctctacttcctcgcgaggatgaaatcaagagaaattctgcgtgactcgttt
tctttttcttctcttctgacgagggattcagtgaaaaaaattactttggcattgggtcaa
aagagttcgtttgctagaggatttgacaagatacttcaagtgcttttggccagcctgagg
gagaactcaccagtgattcgtgctaaggcaatgcgagcggttagtattatcgtagaagca
gatcctgaggttttgggtaacaagcttgttcaaacggcagttgaagggaggttttgtgac
tctgctatatcagtaagagaagcagcacttgagcttgttggaaagcacattgcttcacat
cctgatgttggcataaagtattttgaaaaggtagcagagaggattaaggatactggagta
agtgtccgaaaacgagctattaaaattatcaaggatatgtgtacctcctccattgacttt
tcacagagcaccactgcttttgtggcgataatttctcgtatcaatgatgaagaatccagc
atacaggacctggtctgcaagacattttatgagttttggtttgaggagccttctggttgg
caaaaccgcacttttaaagataacagttcggttcctctagaagtgactaagaagacagaa
caggttgctgagactttgagaaggatgtccagtcaccaaccccttgctattgtcattaaa
agaatcttagcccttgatttctttccccaatctgctaaagctgctgggataaaccctgta
ttactttcatccgtacgcaggcgctgtgagctaatgtgcaagtgtctgctggaaaaagca
ttgcaggttgctgagacaaacagtgaggaaggagaagtccgcatgcttccatatattctt
ctactgcattcattctgtctggtggatcctacattatgtgcaccagcctctgacccttca
cagtttattatcacactacaaccatatttgaagagtcagtctgacaatcgagtggctgct
cagatgctggagagcatattgtttataattgattctgtcttgccattattgcggaaactt
cccgagactgttgctgaggagcttgaacaagacctcaaacaaatgatagtccgacactct
tttctgacagttgtccacgcttgcataaaatgtttatgctctgtggggaaagtatcagga
aaaggtgcaagtgttattcagtatcttatccagttgttctacaaacgcctggacgcattg
gggtttgataacaagcagcaagtaggtagatctctgttttgtcttgggttgttgatacgc
tatggtagcccattgttggatatgtctgctttcaacccaagaaacatggatgtagcaagc
aatatcaacttattcaaaaagtatcttcaggctgaagacttcattattaaagtccgggca
ttacaggctttaggttatgtttttattgcttgtcctgaatgtatgttgcaaaaggatgtc
ggtaaaattttggaggcaactctgtccactggtgctgatgctcgtctgaagatgcaatca
ttacagaacatgtacgagtatcttctggatgcggaaagccgaatggagaaagataaagct
agcaatgatgataataatccatctgctgatggtaccagtgtccctgttgctgccggtgct
ggcgatactaacatttgtggtggtatagttcagctatattggaatagcatcttagcaaga
tgtctggatgcaaatgaacatgtccgtcaagctgctcttaagattgttgaaattgtgctg
cgccaaggtcttgtacatcctattacttgtgtaccatatctcattgcacttgaaacagat
ccggaggaagcaaatgcaaagttgtctcatcatctcttgatgaatatgaatgagaagtat
ccagctttctgcgaaagccgtcttggtgatggacttcatttgtcatttattttcattcgt
accatgagtggagatctccctgaaatgtccaataataagtcctcagctaaattatttaac
aatattaagggaaaaggagatgttgggtcttcaacatttgcgcggcatggtgttgctcga
atctataagctcattcgtggaaatcgtatttcaagaaacagattcatgtcctccattgta
cacaaatttgaaacaccgacctgcagtgattctgtgataccgtttctaatgtattgcgca
gagattcttgctctactacctttcacattacctgatgagcctctttatttgatctatact
ataaaccgagtggtacaagttagctcgggggcagtagaatcaaacattaaggactttttg
catttattacaaggaaacgttcataaaaccaatgggaatggtatggtgcaagctgctcaa
ctggatagcactacaaaccctggtattgaaataaacatggcaactgaggggaaccagaca
ctacccatggagttaccgaatcatctttatggggaagaatcatgtaatgatccaaataca
aatcccataccctcgagagatccctataccatctctgcaagtgattttcagaaaatccag
gccagctttctagcagctggtgcactgcaactgcttctaaagctcaagaggcacttgaag
attgtttatggcctagatgatatccgatgccaggcattttctcctaatgaaccggttaaa
ccaggcgaaagtttaggacggcagaatattccattcactatcagtgatattaacattgat
cctcccaacacctacgaagacgtcatccggagatatcaggaattcaagaatgccttaagg
gaagacacggttgactattcaacctactcagcaaacatcaagaggaaacggccaccctcc
acgagcacaagacgagggaaggctgtccgaatggcagatatggatgatgaagatggctat
gatgatgaagattggggtaacagtgtggccatgatgaacaagagtgccggcaagagaggt
agttacatgagaacgaggcagcgacaacagttgtaa
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integrated database retrieval system
