Salvia splendens (scarlet sage): 121771474
Help
Entry
121771474 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP155-like isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121771474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121771474
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121771474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
121771474
NCBI-ProteinID:
XP_042024193
LinkDB
All DBs
Position
16:complement(11409422..11425792)
Genome browser
AA seq
1483 aa
AA seq
DB search
MVAWENEVVMRDVTNAGVIVSDRIGREIVAQLDLEDALEASRYSSHPYSTHPREWPPLVE
VVDTWELPPVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSG
EEQAICAVGLAKSKPGVFIEAIQYLLVLATPVELILVGVCCSGSSDGTDPYAEVSLQPLP
EYTIPSDGVTMTCITCTDRGHIFLAGRDGHVYELQYTSGSGWKKRCRKVCLTAGLASVIS
RWVVPNVFKFGAADPIVEMVVDSDRHVLYARTEDMKIQVFSLGLNGDGPFKKVAEERNLI
TQRESNYGGRQQAGQRAPARPTKSSIVSISPLSPLESKWLHLVAVLSDGRRMYLSTNPSG
GNNGAVGGLAGLGKPSCLKVVTTRPSPPIGVSAGLSFGALSLAGRSQSDDLSLKIESAYY
SSGTLVLSDSSPSAVSSLLLVNKDPSTQSLSSANLGTGARGSRALRESVSSIPVEGRMLY
VADVFPLPDTASIVQSLYSELELCGSWGSCEKTSVKLWARGDLSTQHILPRRKIVIFSTM
GMMEVVFNRPIDILRRFLESNSPRSLLEDFFNRFGSGEAAAMCLMLAARIVYTENFISNV
VAEKAAEAFEDPRVVGMPQLEGSGALSNTRTTAGGFSMGQVVQEAEPVFSGAHEGLCLCT
SRLLLPLWELPVFVINGGSGSPDTVSEDGIVSCRLSVQAMHVLEDKICSLEKFLRSRKNQ
RRGLYGCVAGLGDITGSILIGSGSDLVADRSMSRNLFGSYSHNVDSSESGSSNKRQRLPY
SPAELAAMEVRAMECIRQLLLRCREALFLLQLLSQHLLARLIQNFDASTRQTVVQLTFHQ
LVCSEDADQLATRLISALMEYYTGPDGRGTVDDISNRLRDGCPSYYKESDYKFYVAVEYL
ERAAATSDTQERENLAREAFNNLSKVPESADLPTVCKRFEDLRFYEAVVRLSLQKAQAGD
PAGDAFNEQIDAGIRQHALSRRMQCYEIITNALRSLKGDALRKEFGSPIKPVLQTALDQA
SRKKYICQIIQLGIQSSDRVFHEYLYRTLIELGLDDELLEYGGPDLVQFLQNAGRDPTHE
PFSLVASSSPMGHSRVQLASNQIKYSELLARYYVLKRQHVLAAQILFRLAERHSTEAVDT
PTLEQRRQYLSNAVLQAKSASESDSLNVSVRGAIDNGLLDLLEGKLAVLQFQIRIKEELE
SMASRLDTSLDGSESTTNGSAPTSGQSSDASFIVSLRDKAKELSMDIKTITQLYNEYAVP
FELWEICLEMLYFASYSGDADSSIVRETWARLIDQALSRGGIAEACAVLKRVGSHVYPGD
AAILPLDTLCLHLEKAAQDRVASGVEPVGEEDIARALLAACRGAIEPVLNTYDQLLSNGG
VLPSPSLRLRLLRSVLVVLREWSMSIIAQRMGTSAAGASLILGGPFSLGQSAAINQGVRD
KITSSAKRCMTEVRRLPLPQHQSEAVYRGFRELEESLLSPFSF
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggttgcttgggagaatgaggtagtgatgcgagacgtcaccaatgcgggtgtgatcgtt
agcgatcgcattggcagggaaattgtggcgcagctcgacctcgaagatgctttagaagca
tctagatactctagccatccttattctactcacccccgcgagtggcctcctttggttgaa
gttgtagacacatgggagttgcccccagtgctgattgaaaggtacaacactgccggtgga
gaaggaacagctctatgtggaatatttccagaaatacggcgggcttgggcatctgttgat
aactccttgtttctttggagatttgataagtgggatggtcaatgtccagaatatagtggg
gaggaacaggctatctgtgctgtgggtcttgcaaaatccaagcctggtgttttcattgaa
gctattcagtatcttctagttttggcaactcctgtggagctgattcttgttggagtatgt
tgttctggaagctctgatggaaccgatccatatgctgaggtttcacttcaaccgctgcct
gaatatacaattccttctgatggagtgactatgacttgcatcacttgcactgacaggggc
catatttttctcgctggccgagatggtcatgtttatgagttgcaatatacaagtggttca
ggttggaaaaagcggtgccgtaaagtttgtcttactgctggtctggcaagtgtaatttca
aggtgggttgtgcctaatgtttttaaatttggagctgcggaccccattgttgaaatggtt
gttgattccgatagacacgttctatatgctcgcacagaagatatgaaaatacaagtattc
tctcttgggttgaatggagatggcccattcaagaaggttgcagaggagagaaatttgatc
actcagagggagtcaaactatggtggcaggcaacaagctgggcaaagggcccctgctcga
cctacaaaatcttcaatagtttccatatcacctttatcccctttagaatcaaaatggttg
catcttgttgctgttttatcagatggacggaggatgtatctctcgactaatccatctggt
ggaaataatggtgctgttggaggtttggctgggcttggtaaaccaagttgtttaaaggtt
gtaacaacaagaccatctcctcccattggggtgagcgctggactttcttttggtgcgcta
tctcttgcgggaagatcccagagcgatgatctttccctgaagattgaatctgcatattat
tcttctggaacacttgtcctttctgattcttctccatctgctgtctcatcactcttgctt
gtaaataaggatcctagtactcaatctctttcatctgctaacttgggaacgggggcaagg
ggttctcgtgcacttagagaatcagtatcatctattccagttgaaggcagaatgctttat
gtggcagatgtttttcccctgccagatacagcatccattgtgcagtctctgtattctgaa
ctagaactctgtggatcatggggatcctgtgagaagacttcagttaaactttgggctaga
ggtgacctttcaacccaacatatattaccaagaagaaaaattgttatatttagtaccatg
ggtatgatggaagtagtttttaatcgaccaattgacattctgaggagatttttagaatct
aattcgccaagatcactactagaggacttcttcaaccgttttggttctggagaggcagct
gcaatgtgtttgatgcttgctgcacggatagtttatactgagaacttcattagcaatgtt
gttgctgagaaagcagccgaagcttttgaggaccctagagttgttggaatgccacaatta
gagggaagtggtgcattgtctaacactagaactacagctgggggattcagcatgggtcag
gttgttcaagaagctgaacctgtattttcaggtgctcacgaaggcctctgcctgtgcact
tcgaggttgctgttgccattgtgggagcttcctgtttttgtcattaacggtggctcagga
tctcctgatactgtatctgaagatggaatcgtatcatgtagactttctgttcaggcaatg
catgtacttgaagacaaaatttgctccctggagaagtttttgaggtctaggaagaaccag
aggcgtggactctatggctgtgtggctggtttaggagacataactggctcgattttgatt
ggaagtggatcagatcttgttgctgacagaagtatgtcgcggaatttatttggttcatac
tcccataatgtggattctagtgagagtgggtcgtcaaataagagacaacgactcccgtat
agtcctgctgagctggctgccatggaggtaagggctatggagtgtatcaggcaattgctt
ctgagatgcagggaagcccttttcctactccaacttctttctcaacaccttctggcacgc
ttgattcaaaactttgatgcaagtactaggcaaactgtagtgcagttgacattccaccaa
ttagtttgttcagaagatgcagaccagcttgcaacaaggctcatatctgctttaatggag
tattacactggtcctgatggcaggggcactgtagatgatattagtaatagacttcgggat
ggctgtccaagctattacaaagaaagcgattacaagttttatgtagctgttgaatatctt
gagagagctgccgcaacttctgatacacaagaaagggaaaatctggcccgggaggctttc
aacaatttaagcaaagttccagagtctgctgatttgccaactgtgtgcaaacgtttcgaa
gatttgagattctatgaagctgtagttcgattatctttgcagaaggcccaggctggggat
ccagctggagatgctttcaatgagcaaatcgatgctgggatccgacaacatgctctttct
cgacgtatgcagtgttatgaaattatcactaatgctttgcgttctctcaaaggtgatgct
ttgaggaaggaatttgggtcgcctatcaaacctgtcctccaaactgcccttgatcaagct
tctcgcaaaaaatatatatgccagatcattcaacttggcattcaatcatctgatagagtc
ttccatgagtatctatatcgaacattaattgagttaggccttgatgatgagttattggaa
tatgggggccctgacttggtgcagtttttgcaaaatgcaggacgtgatcctacacatgag
cccttttccttggttgcatcttcttctcccatgggtcattccagagttcagcttgcttct
aatcagataaagtactctgagcttctggcacggtattatgtcctgaagcgtcagcatgtt
cttgctgctcaaatattgttcaggctagcggaaaggcattcaactgaagctgtggatacc
ccaactcttgagcaaagacgtcagtacttgagtaatgctgttctgcaagcgaagagtgcc
agtgagagtgatagcctcaatgtttcggtccggggtgctattgataatggtcttcttgat
ttacttgaaggaaagcttgctgttcttcaatttcagataaggattaaggaggagttggaa
tctatggcctcaagattggacacttctctggatggatctgaatctaccacaaatggctca
gcacctaccagtggtcagtccagtgatgccagtttcattgtttcacttcgagataaggca
aaggaactgtcaatggatataaaaaccatcactcaattatacaatgagtatgctgttcca
ttcgagctctgggagatatgtctggaaatgctatactttgctagctattctggtgatgct
gacagcagcatagtgagagagacctgggctcgactcattgatcaggctctttcacggggt
ggtattgcagaagcttgtgctgtacttaagagggttggttctcatgtttatcctggagat
gcagctattttgccattggacacattatgtcttcaccttgagaaggcagcacaggatcga
gtggcttcgggtgttgaacctgttggagaagaagatattgcaagggctcttcttgctgct
tgcaggggtgcaatagaacctgttctcaatacttatgatcagttgttatcaaacggtggt
gttttgccttctccaagtctgaggctgcgtcttcttcgctcagttctagtagtccttcgt
gaatggtcaatgtccatcattgcacagagaatgggcactagtgctgctggagcttctctg
attcttggtggaccattttcactagggcagagtgcagctataaatcaaggtgtacgcgac
aagatcactagttccgcaaagaggtgcatgaccgaggtgcggaggttgccccttcctcag
catcaatccgaggccgtctatcgaggttttagggagctcgaagagtcactcttgagtccg
ttttctttttag
DBGET
integrated database retrieval system
