Salvia splendens (scarlet sage): 121771529
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Entry
121771529 CDS
T07627
Name
(RefSeq) chromatin-remodeling ATPase INO80-like isoform X1
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121771529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121771529
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
121771529
INO80 complex (yeast)
121771529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
121771529
NCBI-ProteinID:
XP_042024267
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All DBs
Position
16:complement(18093517..18103948)
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AA seq
1506 aa
AA seq
DB search
MDSNRKYNYGNLFNLEPLINFQLPKQDEDFDCCGNSSQDESRGAQGGALGDMNGTMSERG
SKKKRRSAYSSDEEETGCHSSYISEERYRAMLGDHIQKYKRRLKCAPQNPASTRTGTMAI
KSNVALKDQKPMNDNRGGFPKFESTSDFLNSSSSQKLGNCPESDFGLQYGASRPNLEPPF
LDIGDGITYRIPLPYEKLSSSLGLPSMSDIQVEEFYLKGTLDLGSLAAMMASMNKFQRRS
RAGMGDQRPQYESLQARLRAQQTNYTAENFSLSISEIDMGTDGIPEGAAGRIRRSILSEG
GILQVYYVKVLEKGDTYEIIERGLPKKPKVKKDPSVIEREAMEKFSKYWVNIARKEIPKH
HRIFTNFYRKQITDAKRVSETCQREVKMKVSRSLKLMKGAGIRTRKLARDMLVFWKRIDK
EMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTSEPSGALAV
DDDKSNDQEILSEDQPQEEDDPEAAELRREALRAAHDAVSKQKKMTSAFDNECLKLRLAG
EAEAPLQDGVATESSNIDLLHPSTMPLASTVQTPEMFKGSLKEYQLKGLQWLVNCYEQGL
NGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLP
YWGGLQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAI
KSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGI
ESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTGKTEVTVHCKLSSRQQAFYQA
IKNKISLAELFDGNRGHLSEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFHFGDVPNS
LLPPPFGELEDVFYSGGRSPIAYEIPKLVYQETVGGSKAHNSEAGQSLSRESIQKLFNIF
SPENISSSSLQKDSGRSGTFEFSRFIDLSPSELSFLATGSFMERLLFSIMRSDRQHLDEI
LDLLMESDDGYVQYTNIGKQKVRAVTRMLLLSSRSEKKFLRRKLATGPSDSPFEALIMPY
QDRLLSDIKLVHSVYSFIPRTRAPPINVRCSDRNFAYKMSQEWHDPWLKRLLTGFARISD
CNGPRKPTDTHPLIQEIDAELPITQPALQLTYKIFGSCPPMQPFDPAKMLTDSGKLQTLD
ILLKRLRAKNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRS
DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICK
ETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEHKLKEVSQQAKD
RQKKKSGAKGIRIDAEGAASFQDFAYAESQDYDFEPQDPEKTKSSSKKRKPSGDKQAQPK
ARVQKGSKQMDSPSPNRTIPDYEHEDPSQHTDSTQQRPKRLKRPTKSVNENIEPAFKAIQ
HQSSEL
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggactccaaccggaagtataattacggaaatctcttcaatcttgagcctttgataaac
tttcaactgccgaaacaagatgaagattttgattgttgtggaaatagtagtcaggatgag
agcagaggtgcccaagggggagctttaggcgacatgaatggaacaatgtcggagagggga
tcgaaaaagaagcggcgtagtgcttatagcagtgacgaggaagaaacaggctgtcacagt
tcgtatatttcagaggagcggtatcgtgcaatgcttggagatcatattcagaagtacaaa
aggaggctcaaatgtgccccccaaaatcctgcatcgacaagaactgggacaatggcaatc
aaaagtaatgtggccctgaaagatcagaaaccaatgaatgataacagaggaggatttccc
aagtttgaatcaacttcagattttctaaacagcagtagttcccaaaaacttggaaattgt
cctgaatcagatttcgggctgcaatatggtgcttctagaccaaatcttgaaccgcctttt
cttgatattggggatggaatcacatataggattcctcttccgtatgaaaagctgtcatca
tcactaggtttgccaagtatgtcagatatccaagtggaggaattttacctaaagggtacc
cttgacttgggttcattagctgcaatgatggcgtctatgaacaagtttcagcgtagaagc
agggcagggatgggtgatcaacggcctcagtatgaatcacttcaggcaaggttgagagcc
cagcagaccaattacactgctgagaatttctctctaagcattagtgaaatagatatggga
accgatggcattccagaaggggcagctggaaggattaggcgatctatactgtcagaaggt
ggtatattacaggtttattatgtaaaagttttggagaagggggatacatatgagattatt
gaacgtggtttacccaagaagccaaaggtgaagaaagacccttcggtaattgagagagaa
gcaatggaaaagtttagtaaatattgggttaatatagcaagaaaagaaattccaaaacat
cacaggattttcaccaacttctacagaaagcaaataactgatgctaagagagtttcagaa
acatgtcaaagagaggtgaaaatgaaagtcagcagatccctcaaattgatgaagggtgct
ggaatcaggacaaggaaactggctagagacatgctagtgttttggaagagaattgacaag
gaaatggcggaagtgaggaaaagagaggaaaaagaagctgctgaagctctgaagcgagaa
caagaacttcgtgaagctaagaggcagcagcagaggctcaattttctgttgtcacagaca
gaactgtacagtcacttcatgcagaataagacctcagagccctctggagcattagcagtt
gatgatgacaaatctaatgaccaagaaattctttcagaagatcagccccaggaggaagat
gatcctgaagccgctgaattaaggagggaagctctcagagcagcccacgatgcagtttca
aagcagaagaaaatgacaagtgcatttgataacgaatgcttgaagctacgtttagctgga
gaagctgaggcccctctccaagatggtgtggccactgagtctagcaatattgatttgctg
cacccgtcaaccatgcctctagcatcaacagtgcagacgcctgagatgttcaagggttcc
cttaaagaatatcagctgaaaggccttcagtggcttgtgaattgttacgagcagggcttg
aatggtattcttgctgatgagatgggtctgggaaagacaattcaagccatggcgttcttg
gctcatttggctgaggaaaaaaatatatgggggccttttctggtggttgcacctgcttct
gtcttgaacaattgggctgatgaaatcagccgtttctgtcctgatctgaagactctacca
tattggggtggtcttcaggagcgtacagtgcttaggaaaaacatcaacccaaagcgtctt
tatcgaagggaggctggatttcacattctcatcaccagttaccagctgctggtttctgat
gagaagtacttccgccgtgtaaaatggcaatatatggtgttggatgaggcccaagctatc
aaaagttccaacagtataagatggaaaacactgctcagtttcaattgccgaaatcgcctg
cttctgactggaactccagttcaaaataacatggctgaactgtgggcactcttacatttt
attatgcccactttatttgatagccatgagcaattcaatgagtggttttcaaaaggaatt
gagagtcatgcagagcatggtgggacattaaacgagcaccagcttaatcgattgcatgcc
attctgaaacctttcatgctacggagagttaagaaggatgtggtctctgagctgacagga
aaaactgaagttactgtacactgtaaactaagttctcggcagcaagctttttaccaagct
ataaagaacaagatatcccttgcagaattgtttgacggaaaccgtggacatcttagtgag
aaaaaaattctgaacctgatgaacattgtcatccagctgagaaaggtatgcaatcatcca
gaattatttgagagaaatgaaggaagcacatattttcattttggcgatgttccaaattct
cttctccctcctcccttcggcgagctagaagacgtcttttattctggtggcagaagccct
attgcatacgagataccaaaactggtctaccaagagactgttggtggttccaaggctcac
aactcagaagctggccagagtttaagcagagagtcaattcagaagttatttaacatattc
tcaccagaaaatatctccagttcttcactccaaaaggattctggacgaagtggaacattt
gaattctcccgctttattgatctatcgccatcagaactgtcgttcctggcaactggttct
tttatggagaggttattattctccataatgagatcagatcgccaacatttggacgaaata
ttggacctgttgatggaaagtgatgatggatatgtccagtatactaatattggcaagcaa
aaagtgagagctgtcacgcgaatgttgctactgtctagtaggtcagagaaaaaatttctt
agaagaaagcttgcaacaggtccttcagattctccattcgaggctctaatcatgccttac
caggataggcttctatctgatatcaagcttgtgcattctgtgtactcgtttatccctaga
actagagcacctccaataaatgtccgctgttctgacagaaactttgcatacaagatgtct
caagagtggcatgacccctggttaaagaggttattgactggatttgcacgaatatctgat
tgcaatggcccaaggaaaccaactgacactcaccctttaatacaagagattgatgctgaa
ttaccaattactcaacctgctcttcagcttacatacaagatcttcgggtcttgtccgccc
atgcaaccatttgaccctgcaaaaatgttgacagattctgggaagcttcaaacgcttgat
atacttctgaagcgtctgcgggcaaaaaatcatcgcgttcttctttttgcacaaatgacg
aaaatgctgaatatcctcgaggattacatgaactacaggaaataccggtatttgaggctt
gatgggtcatccacaataatggatcgccgtgacatggtgaaagatttccagcacaggagt
gatatctttgtgttcttgctgagcacaagagctggtgggcttggaatcaacttgacagct
gctgacacagtcatattttatgaaagtgactggaatccaacgttagatttacaggcaatg
gatcgggcccatcgtctgggtcaaactaaggatgtaactgtgtaccgcttaatctgtaaa
gagaccgtagaggaaaaaattcttcagagagcgagtcagaaaaacaccgtccagcagctt
gtgatgactggcggtcatgtccaaggtgaccttttggcccctgaggacgtcgtatcatta
ttgatcgatgatgctcaactggagcataaactaaaagaagtctcacaacaggcaaaagat
aggcagaagaagaaaagtggtgctaagggcatcagaatcgatgcagaaggagctgcgtct
tttcaggattttgcttacgctgaatcacaggactatgactttgaaccacaagatcccgaa
aaaacaaaatccagcagcaaaaagaggaaacccagtggtgacaagcaagcacagccgaaa
gcaagagttcagaagggctccaaacagatggattcaccatcaccaaaccgaacgatacca
gactatgaacatgaggatccctcgcagcacacggactccacacagcaaagaccaaagagg
ttgaaaaggccaacaaagagtgtgaatgagaacattgaacctgcattcaaagctattcaa
caccagagctcagaactgtag
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