Salvia splendens (scarlet sage): 121771642
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Entry
121771642 CDS
T07627
Name
(RefSeq) ras-related protein RABF2b-like
KO
K07887
Ras-related protein Rab-5A
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04144
Endocytosis
sspl04145
Phagosome
sspl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121771642
04145 Phagosome
121771642
04148 Efferocytosis
121771642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121771642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121771642
04031 GTP-binding proteins [BR:
sspl04031
]
121771642
Membrane trafficking [BR:
sspl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121771642
Endosome - Lysosome transport
121771642
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121771642
Exosomal proteins of other body fluids (saliva and urine)
121771642
Exosomal proteins of colorectal cancer cells
121771642
Exosomal proteins of bladder cancer cells
121771642
GTP-binding proteins [BR:
sspl04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121771642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_24
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
121771642
NCBI-ProteinID:
XP_042024397
LinkDB
All DBs
Position
16:2805782..2808616
Genome browser
AA seq
200 aa
AA seq
DB search
MASSANKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTVAANEATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
AGNKADMLDGRAVAPEDAQTYAQENGLFFLETSAKTAANVNEIFYEIAKRLPRLQQTPNP
SGMVLVDRPTERANSASCCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgagcgcaaacaagaacatcaacgccaagctggtactcctaggagatgttgga
gccggaaaatctagtctagtgttgcgttttgtgaaagggcagtttgttgagttccaggaa
tcgacaataggggctgccttcttttcacaaacagttgccgcgaatgaagcaactgtaaaa
tttgagatatgggatacggctggtcaggagagataccacagcttggctccaatgtattac
agaggggctgctgcagccatcattgtctatgatatcacaaatcaagcctcatttgaccga
gccaaaaaatgggttcaagagcttcaagcacaaggtaatccaaatatggttatggcactt
gctgggaataaagcagatatgttagatggacgagcggtggcacctgaggatgctcaaact
tatgcccaagagaatggtcttttcttcttggaaacttctgcaaagacagcagccaacgtt
aacgaaatcttttatgagatagcaaagagattgccacggctgcagcagacaccaaaccca
tcaggcatggtcctcgtggatcgaccaacagaaagggcaaacagtgcttcttgttgttct
tga
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