Salvia splendens (scarlet sage): 121771651
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Entry
121771651 CDS
T07627
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121771651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121771651
03036 Chromosome and associated proteins [BR:
sspl03036
]
121771651
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121771651
Coactivators
SAGA/TFTC/STAGA complex
121771651
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121771651
STAGA complex
121771651
TFTC complex
121771651
SAGA complex
121771651
SLIK complex
121771651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
121771651
NCBI-ProteinID:
XP_042024413
LinkDB
All DBs
Position
16:1254984..1261565
Genome browser
AA seq
756 aa
AA seq
DB search
MAENSPSSSSPPKPLPVQQSPAMIEPPSNSQQLQPLQSPSPSLDHQQQQQQLMQSQQQQL
VQSQQQLVQQQQQPQQQQLQQLQQQIMQQQGNNSSVNGGSGGSNLIGVSNFQGMQRNPSI
ARLNQMQQSGSINSQLGMMRQQHQQQQNSSAIYGQMNFGGMSVTQQQQQSSSVGINGGNS
SQQQQQKMGQQSQLQQQIGQPSQMQQQMGQQSQLQQQMGQNQLQQQLGQQNQLQQQLGQQ
NQLQQQQQQIGQQNQLQQIGQQSQLQQQVGQQSQLQQQLGGQGSMQQQQQQMGQGQLQQS
QMGQMAGGNLSRSALMGQTGHLPMLSGQAAQFNLQNQFLNSPRQKAGFMQGSQFHQGNSP
GQSLPGMQAMGMMGSINLASQLRPNSTLAYAQQRMTASQLRQHLSQQNALTTGQKLQGQN
IARTSFMNAQIAGLAQNGQPGMMQNAISQQQWLKQMPAISSPNTSSYRLQQQLLMQQQQQ
LSQIVQQQTQAQSQMHQQKQQQQLQSPMQQPQQPPQQQLFHQQQSPRIAGPGGQKLVSLT
GSQPDATGSGATTPGGSSSHGTEAGNQLLGKRKIQDLVSQLDFNGKLDPEVEELLLEIAD
NFIDSDCRRLYHVRQRLFGIVSSVSRYFFKQMLLLEDVTTFACTLAKHRKSSTLEAKDVL
LHLEKNWKLTIPGYSSEEKKQSTENPPTDAHKKRMDVIRTLTEPVQSETNSGAKQMVRQG
SGNQVGQNHMIRPSPSSEQLVSQSAVPQMLQQNTRF
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaattcgccgtcatcgtcttccccaccgaaacccttaccagtgcagcagagc
cccgccatgattgaacctccttctaattcgcagcaattacagccgctgcaatccccatct
ccgtcgctcgaccaccaacagcagcagcagcaactgatgcaatcgcagcagcagcaattg
gtacaatcgcagcagcaattggtacaacaacagcagcagccgcagcagcagcaattgcag
cagctacagcagcagataatgcagcagcagggcaacaacagcagcgtcaatggcggtagt
ggcggtagcaatttgataggagtttcgaattttcagggtatgcaaaggaatccttcgata
gctaggcttaatcagatgcagcaaagtggtagtattaatagtcagttaggaatgatgaga
caacagcaccaacaacagcagaattcgtcggcaatttacggtcagatgaattttggtgga
atgagcgtgacgcagcaacagcagcagagcagtagtgttggtatcaatggaggcaatagc
agccagcagcagcaacagaagatggggcaacaaagccaattgcagcaacaaatcgggcag
ccaagccaaatgcagcagcaaatggggcaacagagccaattgcaacagcaaatggggcaa
aaccagttgcagcagcagttagggcagcaaaatcagttgcaacagcagctggggcagcaa
aaccagttgcagcagcagcagcagcaaattgggcaacagaatcagttacagcagatcggc
cagcaaagtcaactgcagcagcaagtcgggcaacagagtcagttgcagcagcaactagga
ggacagggctcgatgcagcagcagcagcagcaaatggggcagggccaattgcagcaatca
caaatggggcagatggctggtgggaatttgtcgaggtctgctctgatggggcagactggg
catttgccaatgctatctggtcaagcagcccagtttaatttgcaaaatcagtttttgaat
tcgccacgtcagaaggcggggttcatgcaagggtctcagttccaccagggtaattctcct
gggcagtcattgccaggaatgcaagcaatgggaatgatggggtcaattaatctggcttct
caactaagaccaaatagcacacttgcttacgcccagcagagaatgacggcaagccaacta
aggcagcatctttctcagcaaaatgcacttactactggccagaaattgcaggggcagaat
attgcaaggacgtcatttatgaacgcgcaaattgctgggctggctcaaaatggacaaccg
ggtatgatgcagaatgctatatctcaacagcagtggttaaagcaaatgccagcaatatcc
tcccccaacacttcttcatatcgtcttcaacaacagctgctcatgcaacaacaacagcag
ttgtctcaaatagtacaacagcaaacgcaggcccagtcacagatgcatcagcagaaacaa
cagcaacagctgcagtcgccaatgcagcagccgcagcagcctccacaacagcagcttttc
catcagcagcagtcaccgagaatcgctggaccgggagggcagaaattggtgagtttgact
ggatcacagcctgatgccactggatcaggagcaactacaccaggtggaagttcaagccat
ggcacagaagctggtaatcaacttcttgggaagagaaagatacaagatttagtgtcacag
ttggatttcaatgggaaactggaccctgaagtcgaagagcttctgttagagattgctgat
aactttattgattcggactgcaggaggttataccatgttagacagaggttatttggaatt
gtcagctctgtatctcgctatttctttaagcagatgctgctacttgaggatgttactaca
tttgcatgcaccttggcaaagcatcgcaaatcttcaacgttggaggccaaggatgtcttg
ctgcatttagagaaaaactggaaactgaccattcctgggtattcgagcgaggagaaaaaa
caaagtactgaaaatccccctactgatgcccacaaaaagcgtatggatgtgattcgtacc
ttgactgaacccgtacaatctgagacaaatagtggagctaagcagatggtcaggcaggga
tcaggaaatcaagttggtcaaaaccatatgataagaccttctccaagctctgagcagtta
gtttcgcagtctgctgtgccccaaatgctgcagcagaatactagattctga
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