Salvia splendens (scarlet sage): 121771964
Help
Entry
121771964 CDS
T07627
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121771964
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121771964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
121771964
NCBI-ProteinID:
XP_042024804
LinkDB
All DBs
Position
16:17375053..17382365
Genome browser
AA seq
437 aa
AA seq
DB search
MAEPSKVIHVRNVGHEIAESDLLQLFQPFGVIAKLVMLRAKNQALLQMQDVPSAVNALQF
YSNVQPSIRGRNVYIQFSSHQELTIMDQSSQARGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQSHQSAISARNALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPSLPSEQKGKSSQPGYGDPSIYPHAVGFAQLGNAAAIAAAFGGGLP
PGISGTNERCTVFVSNLNADRMDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGFQA
ELAVHFLKGAMLFGKRLEVNYSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSPTK
MIHISTLPQEVTEEEIVNHLEEHGTIASTKLFEMNGKKQALVLFENEEQATEALVCKHAT
SLGGSTIRISFSQLQTI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccctcaaaagtcattcatgttcgtaacgtgggtcatgaaattgctgagagt
gacttgctgcagctgttccagccatttggagttatcgccaaacttgtgatgcttcgagcc
aagaatcaggccctcctacaaatgcaagatgttccttctgcagtgaatgcattgcagttc
tacagtaatgtccaaccgagcataaggggcaggaatgtctatatccaattctcatcacac
caggaactaacgattatggatcaaagttcgcaagcacgtggagacgagcctaaccgaatc
ctcttagttacgatacatcacatgctatatcctattactgtggaagtgctgcatcaagtt
ttttctccccatggatttgtagagaagatcgtcacgtttcagaagtcggctggttttcaa
gctctaatacagtatcaatcacatcaaagtgctatctcagctaggaacgctcttcaggga
cgaaatatatatgacggttgctgtcagttagatatccagttctcaaaccttgatgaattg
caagtgaattataataatgagcgttctagggatttcacaaacccttccttgccttcggaa
caaaagggcaaatcctctcaacctggatatggagatccaagcatatatccccatgcagtg
ggattcgcacagttgggcaatgctgcggcaattgctgctgcctttggagggggtctccca
cctggtataagcggtacaaatgagcggtgcacagtttttgtatctaatctgaatgctgat
agaatggatgaggataagctgtttaatttgttctcgatatatgggaacattattagaatc
aaacttctccgaaacaaaccagatcatgcattggtacagatgggtgatggttttcaggct
gaactggctgttcattttttgaagggggctatgctgtttggaaagcgcttggaggttaac
tattcaaagcatccaaacattacaactggagctgatacgcatgagtactccaactcaaat
ctcaatcgtttcaatcgaaatgcagccaaaaattacaggtattgctgctcaccaacaaaa
atgatccacatctcaactctcccccaggaagtaactgaagaagaaatagtaaatcatttg
gaagagcatggaacaattgctagtacaaaactgtttgagatgaatggaaagaagcaggct
cttgtcctttttgaaaatgaggagcaggctacagaagctcttgtgtgcaagcatgccact
tcccttggtggttcaaccattcgaatttccttctctcagttgcaaaccatttga
DBGET
integrated database retrieval system
