Salvia splendens (scarlet sage): 121771964
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Entry
121771964 CDS
T07627
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121771964
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121771964
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
121771964
NCBI-ProteinID:
XP_042024804
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All DBs
Position
16:17375053..17382365
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AA seq
437 aa
AA seq
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MAEPSKVIHVRNVGHEIAESDLLQLFQPFGVIAKLVMLRAKNQALLQMQDVPSAVNALQF
YSNVQPSIRGRNVYIQFSSHQELTIMDQSSQARGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQSHQSAISARNALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPSLPSEQKGKSSQPGYGDPSIYPHAVGFAQLGNAAAIAAAFGGGLP
PGISGTNERCTVFVSNLNADRMDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQMGDGFQA
ELAVHFLKGAMLFGKRLEVNYSKHPNITTGADTHEYSNSNLNRFNRNAAKNYRYCCSPTK
MIHISTLPQEVTEEEIVNHLEEHGTIASTKLFEMNGKKQALVLFENEEQATEALVCKHAT
SLGGSTIRISFSQLQTI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccctcaaaagtcattcatgttcgtaacgtgggtcatgaaattgctgagagt
gacttgctgcagctgttccagccatttggagttatcgccaaacttgtgatgcttcgagcc
aagaatcaggccctcctacaaatgcaagatgttccttctgcagtgaatgcattgcagttc
tacagtaatgtccaaccgagcataaggggcaggaatgtctatatccaattctcatcacac
caggaactaacgattatggatcaaagttcgcaagcacgtggagacgagcctaaccgaatc
ctcttagttacgatacatcacatgctatatcctattactgtggaagtgctgcatcaagtt
ttttctccccatggatttgtagagaagatcgtcacgtttcagaagtcggctggttttcaa
gctctaatacagtatcaatcacatcaaagtgctatctcagctaggaacgctcttcaggga
cgaaatatatatgacggttgctgtcagttagatatccagttctcaaaccttgatgaattg
caagtgaattataataatgagcgttctagggatttcacaaacccttccttgccttcggaa
caaaagggcaaatcctctcaacctggatatggagatccaagcatatatccccatgcagtg
ggattcgcacagttgggcaatgctgcggcaattgctgctgcctttggagggggtctccca
cctggtataagcggtacaaatgagcggtgcacagtttttgtatctaatctgaatgctgat
agaatggatgaggataagctgtttaatttgttctcgatatatgggaacattattagaatc
aaacttctccgaaacaaaccagatcatgcattggtacagatgggtgatggttttcaggct
gaactggctgttcattttttgaagggggctatgctgtttggaaagcgcttggaggttaac
tattcaaagcatccaaacattacaactggagctgatacgcatgagtactccaactcaaat
ctcaatcgtttcaatcgaaatgcagccaaaaattacaggtattgctgctcaccaacaaaa
atgatccacatctcaactctcccccaggaagtaactgaagaagaaatagtaaatcatttg
gaagagcatggaacaattgctagtacaaaactgtttgagatgaatggaaagaagcaggct
cttgtcctttttgaaaatgaggagcaggctacagaagctcttgtgtgcaagcatgccact
tcccttggtggttcaaccattcgaatttccttctctcagttgcaaaccatttga
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