Salvia splendens (scarlet sage): 121772009
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Entry
121772009 CDS
T07627
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121772009
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121772009
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121772009
Prokaryotic type
121772009
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
121772009
NCBI-ProteinID:
XP_042024858
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Position
16:complement(12237003..12240590)
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AA seq
381 aa
AA seq
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MISSTVKQITKTLFAFPLKTNNQMLSLNPATSNLLNFNQFHQFPPPTLRHHLPIQPRTVN
AAVQSSGFTGGGGGGSGFLTAIGRAIEEEEYRKARAEVHKKSIDLDGYSIEGLSIGGHET
CVIVPELKTAFDIGRCPAKAVQQNFLFITHAHLDHIGGLPMYIATRGLYSLKPPTVFVPP
SIMEDVEQLINIHRNMGQVELNIDLVPLDVGETYEMRNDLVVRPFRTHHVITSQGYVIYS
VRKKLRKQFTHLKGKQIEKLKKSGVEITDTILSPEVAFTGDTTSDFYLDPRSADALRAKI
LITEATFLDESVSVEHAREHGHTHIDEIMENAQWIRNKTVVLTHFSSRYHLEDIRQAVSK
LQSKVSAKVMSLTEGFKSMHA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatatcttcaacagttaaacagataacaaaaacactttttgcgttccctctcaaaaca
aacaaccaaatgctgtcactaaacccagcaacctcaaacttgctcaatttcaatcaattt
caccaatttccaccgccaaccctcaggcatcaccttccaatacaacctcgaaccgtcaat
gcggcggtgcagagcagcggatttactggcggcggcggcggtggttcaggttttttgaca
gcaattgggcgtgcaatcgaggaagaagagtacagaaaggccagggctgaggtccacaaa
aaaagcatcgatttagacggatattccatcgaaggactgtcgattggtggccacgaaact
tgcgttattgtgccggaattgaagacggctttcgatatcgggaggtgccccgccaaggct
gtgcagcagaattttctcttcattacacatgctcatctcgaccacattggtgggctgccg
atgtatattgcaacccgtggtctttacagcttaaagccccctaccgtgtttgttcctcca
agcataatggaagacgtagaacaattaattaacattcacagaaacatgggtcaggtggaa
ctaaatattgatttggttcctctggatgtaggggaaacatatgaaatgcggaatgatctt
gttgtacgaccattcagaacgcaccatgttataaccagccagggttatgtgatttactcg
gtcaggaagaaactgagaaaacagttcacacatttaaaaggaaaacaaattgagaaactt
aagaagtctggagttgagatcacagatactatcttaagccctgaggtggccttcacggga
gataccacgtcagacttttaccttgatccacgcagtgctgatgccttgcgggccaagatt
ctcataactgaggctacatttctggatgaaagtgttagcgttgagcatgcacgagagcac
ggccatactcatattgatgagatcatggaaaatgcacaatggattcggaacaaaaccgta
gtgctgactcatttctcatctcgctaccatctagaggacattcggcaagctgtgtcgaaa
ttgcagtcgaaggtgtcagctaaagtgatgagtctaacagagggattcaaatcaatgcac
gcttag
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