Salvia splendens (scarlet sage): 121772049
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Entry
121772049 CDS
T07627
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04145
Phagosome
sspl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121772049
09142 Cell motility
04814 Motor proteins
121772049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121772049
03036 Chromosome and associated proteins [BR:
sspl03036
]
121772049
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sspl04812
]
121772049
04147 Exosome [BR:
sspl04147
]
121772049
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121772049
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121772049
Cytoskeleton proteins [BR:
sspl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121772049
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121772049
Exosomal proteins of other body fluids (saliva and urine)
121772049
Exosomal proteins of colorectal cancer cells
121772049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121772049
NCBI-ProteinID:
XP_042024921
LinkDB
All DBs
Position
16:4253092..4255417
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDHTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRKSLDIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNTAFEPSS
MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGEDDEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgtatctcgatccacattggtcaggccggtatccaggttggaaatgcttgc
tgggagctctattgcctcgaacacggaattcagcctgatggacagatgccgggtgaccac
actgtaggcggaggtgatgacgccttcaacaccttcttcagtgagaccggtgctggaaag
cacgttcctcgtgctgtgtttgtagatcttgagcctaccgtgattgacgaggtgcgcact
ggcacataccggcagttgttccaccctgagcagcttatcagtgggaaggaagatgctgct
aacaactttgccagaggccattacaccattggcaaagaaattgtggatctttgccttgac
aggatccgtaagctggctgacaactgcactggattgcaaggattccttgtcttccacgct
gttggtggtggaaccggttctgggcttggttctctgttgcttgagaggctctctgtcgac
tatgggaaaaagtcgaagctgggcttcaccatctacccttccccacaggtctccactgct
gttgttgagccttacaactccgtgctctccactcattcccttttggagcacacagatgtc
gccatccttcttgacaatgaagctatctatgacatttgccgcaaatcactcgacattgag
aggcccacttacaccaatctgaacaggctcatttctcaggttatctcttcattgactgct
tccctgagatttgatggtgctcttaacgtggatgtgaacgagttccagaccaacttggtg
ccatacccaagaatccacttcatgctttcatcgtatgccccagtcatttcagctgagaaa
gcataccacgagcagctctctgtcgctgagatcaccaacactgcgttcgagccatcgtct
atgatggttaagtgtgacccgcgccatggaaaatacatggcctgctgtctgatgtacaga
ggtgatgtcgtccccaaggatgtcaacgcagctgtggcaaccatcaagaccaagaggacc
atccagttcgtcgactggtgccccactggattcaagtgcggtatcaactaccagccgcca
actgttgtccctggtggcgaccttgccaaggtgcagagggctgtttgcatgatctccaac
tccaccagcgttgcagaggtgttctcgaggatcgaccacaagttcgatctgatgtatgcc
aagcgtgcttttgtccactggtacgtgggtgagggtatggaggaaggagagttctccgaa
gctagggaagacttggctgcccttgagaaggattatgaggaggttggtgcagagtctgct
gaaggcgaagatgatgaaggcgaagagtattag
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