Salvia splendens (scarlet sage): 121772130
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Entry
121772130 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121772130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121772130
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121772130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
F1F0-ATPsyn_F
Motif
Other DBs
NCBI-GeneID:
121772130
NCBI-ProteinID:
XP_042025055
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Position
16:5779895..5783511
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AA seq
477 aa
AA seq
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MAFSFSPQQPQQSLFQTPIQQPSPFQPQQQQQQQSPFQLQLSQPQQQQSQPQPQQLPQLY
LFTNDKVPASYGTKWADLHPDSQKVLLQIEEKILEYRDESQRLDQCSRLFDSSVSNNGFE
LDASSIVQELGGITISMERQKATLQELMTVVKDMLRNTEVAVRSFMILRPRFLHQNKNSP
AGATAPSQPSGATVTQTSTGQPAGNSMAPVFDFYSGLPKKPSPFLQQTVARFEKYLSECR
QWIEELEQLLLLDSGKHSLNSSSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMRTA
YLADQRHRGDENDPFLEADRRETAKQEAAARRVHPTIHLPNVPQPSGQATGLLALSAPTG
ASTSTNPSSSTTAPASSGTGSLFFPTPAAASSTPSLFSTPTSSAPFSSLLGTAASQSSLF
SSLSASSSAFGISTPISSTPAAAPAFSTPFATGAATGSGASFGMASKARAKSRTGRR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcattctcattctcccctcagcagccccagcaatctctattccagactcctattcaa
caaccctcgccgttccaaccccaacagcagcagcaacaacaatctcctttccagttacaa
ttgtcgcagccgcaacagcagcagtctcagccacagccgcagcaactgccgcagctctat
ctcttcacgaatgacaaagttcccgcttcttatggtaccaagtgggctgatttacatcct
gattctcagaaagtcctgcttcaaattgaggagaagatattggagtacagagacgaaagc
cagagattggaccaatgcagcaggctctttgattcgtctgtctctaacaacggatttgag
cttgatgccagctctattgtgcaggaacttggtggaattaccatttctatggagaggcag
aaggcgaccctgcaagagcttatgactgttgtgaaagatatgctgcgaaatacagaagta
gctgttcgatcttttatgattttacgacccaggtttcttcaccaaaataaaaattctcca
gcgggtgccactgcaccatcccagccttctggggcaactgtcactcaaacatcaactggt
cagcctgcgggaaactctatggctcctgtttttgatttttacagtgggctaccgaagaag
ccgtcgccctttttgcagcaaactgttgcccgatttgagaaatatctttcggagtgtcgt
cagtggattgaagaattagaacaactgctacttttagactctggaaaacattctttaaat
tcgagttcttcattgttgcaatctctgcctaaagtcatgactaacgtacatgacttcttt
gttcatgttgcagctaaggtggaaagtattcatcagtacatcgaatctatgagaacagca
tatcttgctgaccaacgccatcgaggagatgagaatgatccgtttcttgaagctgatagg
agggaaacagcgaaacaggaggctgcagctcgaagggttcatcccactatacatttacct
aatgttcctcaaccatctggtcaggctacaggactcttagccttgtcagcgccaactgga
gcatcaacttcaacaaacccgtcaagctctactactgcaccagcatcaagtggaactgga
tctctattctttcctactcctgctgctgcctcatcaacaccctctttattctcaacccct
accagttcagctccattctcatctttgttaggaactgctgcttcacagtcatcacttttt
agttccttgtctgcttcctcatctgcctttggtatttccacacccattagttcaacccct
gctgcagcaccagcattctcgacgccttttgctacaggagctgcaactgggtcaggagca
agctttggaatggcatcaaaggcgagagcaaaaagtcgtacagggcgacgctag
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