Salvia splendens (scarlet sage): 121772230
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Entry
121772230 CDS
T07627
Name
(RefSeq) SUPPRESSOR OF ABI3-5-like isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121772230
Spliceosome [BR:
sspl03041
]
Complex A
Other components
Complex A specific factors
121772230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
121772230
NCBI-ProteinID:
XP_042025174
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All DBs
Position
16:10413859..10422056
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AA seq
1020 aa
AA seq
DB search
MDPGRYGLHQGWENNSALEGYGAAHDTNFRDDGSYDDRRFIDERFSRDNVYPRGAFHRDV
LERDNYPPPPSSVGMWPQTRRRSYEEEYSLDRDIRRHAKPPSRYGGRDREDYGYDDYDYR
SRASHQSKEDSRDRDYDHGRHSYDSDYERSGRRDGNWRRRESRDREWDKRGVSRERDESP
YRRHEHSPSHSRSRSRDRDDWARSKSPRGRSHGRSYREDSYEDSRYERGDRRRDREDRRQ
NNHSVAPSATVVVKGLSQKTTEEDLYQILVEWGPLRHVRVIKERNSGVSRGFAFIDFPSV
DSAQAMMDKLGHEGLLVDGRKLFFEYSSKPTGANGIVGMDSGSRSGHGSYRSMMVPSDWM
CTICGCVNFARRTSCFQCNEPRTDDAPPADMASSNFNPAGKRGESGPTHVLVVRGLDENA
DEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFIHFYSVEDATKALEATNGTTLEKNGQ
ILRVAYAKSIVGPGSAVSGASQSSSLAAAAIEAATFAQQYDAVGWAPKEYNPEDNQSGGG
HGQSGHVAGETDSSAPQSGFVWDEASGYYYDATSGFYYDGTTGLYYDGNNGLWYSYDQQT
QQYIPCNDQNGKTSEKQIDASKTSDASNNRKVIISAPAATITSNEKAASLPDAVQAAAAA
ALAAEKKEKEKLKEIRLASKSSIMANKKKMNNVLTMWKQRSNEGQAPRVALEDNQPSASV
EERSNPASSMKSKLINGLVAKENVIASAGLMSASTQSAGMESQNRTKPISASSSGTLKGV
IRSSGMGVVKYDSVYMGPEGTTASSFGASSAGSSSLTHTEHSTPATPYRTGASALGGYAP
SSATGSGKRRFSEMPTTSVTNKEQSQSTYRDRAAERRSLYGSSSAFGDDDMNAGIVDSNR
DPAYRRGGLDSMPFPPGVGGGRSSGDANIQSYEVITADKAIDESNVGNRMLRNMGWHEGS
GLGRDGSGMVEPVQAQATETRAGLGIHQPKKVDPSLEVQAGDSYKAVIQKKAIARFREMS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggaccctggacgctatggtcttcatcaaggatgggaaaataacagcgctttggagggg
tatggtgctgctcatgatacaaattttcgggatgatggatcttatgatgataggaggttt
atagatgaaaggttctctagggataatgtctacccaaggggtgcctttcatcgagatgta
ctggagagggataattatcctccacccccatcatcagttgggatgtggcctcaaacgagg
aggagaagctatgaagaagagtattctttggatagggatattagaaggcatgcaaagccg
ccttctaggtatggcggccgtgatcgggaggattatggctatgatgattatgactacaga
tctcgtgcttcccatcaaagcaaggaggacagccgtgacagggattatgatcatggaaga
cacagttatgattctgactacgagaggagtggtagaagagatggtaactggagaagacgt
gaatctcgggatcgagaatgggacaagagaggtgtgagtcgtgaaagggatgaaagccct
tatagaaggcatgagcattccccttctcattctcgatctcgttctcgtgatcgtgatgat
tgggctaggtcaaagtctcctcgaggccgcagtcatggtcgaagttatagggaagacagc
tatgaggacagtcgttatgaaagaggtgacaggagaagggatcgtgaagataggcgtcag
aataaccattctgttgcgccttctgccactgttgtggtgaagggtctttctcaaaagaca
accgaagaagatttgtatcagattcttgtggagtggggaccccttcgtcatgttagagtt
attaaagagcgaaactctggcgtctctcgtggatttgcttttattgatttcccttctgtg
gattcagcacaagcaatgatggataagcttgggcatgaaggtcttcttgttgatggaagg
aagctcttctttgagtacagtagtaagccaactggtgctaatggaattgttgggatggac
agtggatctagatcaggccatggtagctatagaagtatgatggtgccatctgattggatg
tgcacaatatgtggctgtgtcaattttgcccgaaggacatcttgttttcagtgtaatgaa
ccaagaacagacgatgctccccctgctgatatggcatcgtcaaattttaatccagctggc
aagagaggggaatcaggcccaacacatgttcttgttgtccgtgggttggatgaaaatgct
gatgaggaaatgctacgctatgaattttctaaacatgcccctattaaggatttgcggtta
gttagagacaaattcacacatgtttcaagaggatttgcatttatccatttctattccgtt
gaggatgccactaaagctcttgaagcaacaaacggtactactttggagaagaatggtcag
attcttagagttgcctatgccaaaagtattgttgggcctggatcagctgtttcaggagct
tctcagtcgagcagtcttgctgcagctgcaattgaagcagctacatttgctcagcagtat
gatgctgttggctgggcacctaaagaatacaatccagaggacaaccaatctggtggaggt
catgggcagagtggacatgttgcaggagaaacagattcttcagctccacaatctggtttt
gtgtgggacgaagcctctggttattactatgatgctacctctggtttctactacgatgga
accacaggtctatattatgatgggaataatggtctctggtattcttatgatcaacaaact
cagcagtatattccttgtaatgatcagaatggcaagacatctgaaaaacaaattgatgct
tctaagacatcggatgcttctaataatcgaaaagtcatcatttctgcaccagctgctacc
ataacttcaaatgagaaagctgcttcattaccagatgctgtccaggctgcagctgctgct
gcgctagcagctgagaagaaagaaaaggagaaacttaaagagatcagacttgcttccaaa
agtagcataatggctaacaagaagaagatgaataatgtcttaaccatgtggaagcaaaga
agtaatgaaggacaagcaccacgagtggctctcgaggacaatcagccgtccgcatcagtt
gaagagagatctaacccagcatcatctatgaagagcaaattaataaatggactggtagca
aaagagaatgttatagcttctgcaggattgatgagtgcctcaactcaatctgctggcatg
gaatcccagaacaggacaaagcccatcagcgccagttctagtggaaccttaaaaggagtg
attaggagttctgggatgggtgttgtgaaatatgattctgtttatatgggaccagaaggt
acaacggcttcatcatttggtgcatcttctgcaggatcttcttcattgacacataccgaa
cattccacaccggctacaccatatagaacaggcgcatctgcattaggcggatatgcacca
tcttctgctacaggaagtggtaaaagaaggttttctgagatgcccaccacttctgttaca
aacaaagaacagtctcaatcaacttatcgagatcgtgcagctgaaagaagaagcttgtac
ggttcatcatcggcttttggggacgatgacatgaatgctggaattgtagactcaaaccga
gatccagcatatagacgaggtggtttggactctatgcctttccctcctggtgttggtggt
ggacgaagtagtggagatgcgaatatccagagttatgaggtgattacagcagacaaagcc
attgatgagagcaatgtggggaaccggatgctccgcaacatgggctggcatgaaggctcg
gggctggggagagatgggagtggcatggtagagcccgtacaggctcaggccacagaaacg
agagcgggactagggatccatcaaccgaagaaagtggatccgagcctggaggttcaggca
ggagatagctacaaagctgttattcagaagaaggcgattgctcgttttcgagaaatgtca
tga
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