Salvia splendens (scarlet sage): 121772262
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Entry
121772262 CDS
T07627
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121772262
03036 Chromosome and associated proteins [BR:
sspl03036
]
121772262
Transcription factors [BR:
sspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121772262
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121772262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_box_5
HMG_WDHD1
YL1
CDC45
Motif
Other DBs
NCBI-GeneID:
121772262
NCBI-ProteinID:
XP_042025217
LinkDB
All DBs
Position
16:complement(4096027..4101433)
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AA seq
644 aa
AA seq
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MADGHSFNNISLGGRGGTNPGQLKVHSGGIIWKKLGGGKAVDVDKSDLLGLTWMKVPRSN
QLGVRTKDGLNYKFTGFRDQDVASLNTFFQSNFSATPEEKQLSVSGKNWGEVDLNGNTLT
FLVGNKQAFEISLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPSAQVFRDKIVSMADVGAGGEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRVFWLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDAIMDTTLSMS
EDLYNSKYKEKLEPDHKGLIHEVFITILRGLSGAKVTKPGKFRSSQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDFLIRLKTEQEHLFRNIQ
RNEYHNLFQFVKDKDLKIMNFNAGSVPNAEGVAAVLQSDIDDAVDPHLERIRNEAIGDES
DEEDEDFVIDKDDGGSPTDDSGGDDSDASDSGGEKEATPKKKPKKEPSAAKASSSRKKTK
DDDDDGKKKKQKKKKDPNAPKKAMSSFMFFSQAEREDVKKTNPGIAFTEVGKVLGERWNK
MTAEEKAPYEAKARADKKRYGDEISGYKNPQPMAIDSPDGSDTS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcattccttcaacaatatctctctcggtggtcgtggaggaactaatcca
ggacaacttaaagttcactcaggtgggataatatggaagaaactaggaggtggcaaggcc
gtggatgttgataaatctgatttgctgggccttacatggatgaaggtacctcgatctaac
caacttggagttcggaccaaagatggcctcaactacaagtttactggtttccgggatcag
gatgtggcaagccttaatacattcttccagtccaatttttcagcaactccagaggagaag
cagctctctgtcagtgggaaaaattggggagaagttgatttaaatgggaatacacttact
tttcttgtgggtaataagcaagcattcgagatatctctagccgatgtagcacaaacccaa
cttcaagggaaaaatgatgtcatgctggaattccatgttgatgatacaactggtgccaac
gagaaagactcattaatggaaataagtttccacatccctaattcaaatactcaatttgtt
ggcgatgaaaaccgaccttctgctcaggttttcagagacaagattgtctccatggcagat
gttggagcaggaggtgaagaagctgttgttacatttgatgggatcgccatacttactcct
aggggacgatacagtgtcgaacttcatctttcctttttacgtctccaaggacaagctaat
gacttcaaaattcagtacagtagtgtagttcgtgttttttggttgcctaagttcaaccaa
ccgcacacctttgttgttgtgacacttgatccaccaattaggaagggccaaaccttgtat
ccacatattgtgatgcagtttgagactgatgctattatggacaccactttgtcaatgagt
gaagacctttacaattccaaatacaaagaaaagcttgaaccagatcacaagggactcatc
catgaggtcttcattactatattgcgtggtttatctggtgccaaagtcactaaaccagga
aaattccgtagtagtcaggatggttatgctgtcaagtcatcgctcaaagctgaagatgga
gttctctatcctcttgaaaagagctttttctttttacccaagccacccactctaattctt
catgaggagattgactacgtggagtttgagaggcatactgctggaggttcaaacatgcat
tattttgattttctcatcagacttaagactgagcaagagcaccttttcagaaatattcag
agaaatgagtatcacaatctctttcaatttgtcaaagataaagatttgaagattatgaat
ttcaatgcggggagtgtcccgaatgccgaaggagttgcagctgttctgcagagtgatatt
gatgatgctgttgatccacatctcgagagaatcaggaatgaagcaattggagatgagagt
gatgaggaggatgaagattttgttattgataaagacgacggaggctcccccactgatgac
tctgggggagacgactctgatgctagtgacagcggaggggagaaagaggcaacaccgaaa
aagaagcccaagaaggaaccttctgctgctaaggcgtcatcgagtaggaaaaaaacaaaa
gatgacgatgatgatggaaagaagaagaaacaaaagaagaaaaaggatccgaatgccccc
aaaaaagcaatgagttccttcatgttcttctctcaagccgaaagagaggatgtgaagaag
actaatccaggaattgcgtttacagaagtaggaaaagtactaggagaaagatggaataag
atgacagccgaggagaaggctccatatgaagcaaaagcccgggctgacaagaaacgctac
ggtgatgagatcagtggctataagaatccacagccgatggcaatcgactcaccagatgga
tctgacacctcttag
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