Salvia splendens (scarlet sage): 121772311
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Entry
121772311 CDS
T07627
Name
(RefSeq) nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121772311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121772311
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121772311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
121772311
NCBI-ProteinID:
XP_042025286
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All DBs
Position
16:18072244..18077723
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AA seq
864 aa
AA seq
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MTSDADMSGWTGLLHSSSKLIEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRAEAPSQS
IAATRLLAREGLNAEQLARNLKSFELKTTFEDVFPAEATTVEEYLQQVHEMAMLSAVQEA
QKDNLRSFNDYMMSVLQEDWQKEKRDFLQSLNRISILPKTNVHDSSSGVSRQGQIVPMTS
SPGLSSGQSGAELALMADKPIVEKKAAAYAEVVKNLNSARQHGSPFKPAAAFKSAYESLR
IDSSGSKSVGMLKIWHLIMTLMGEDPSVKRSVSKRMSLVIGARHHLEWGHEKYVMDMIHS
HPAQAALGGAVGNLQRIRAFLRMRLREYGVLDFDAGDTRRQPPIDTTWQQIYFCLRTGYH
EEALGVARTSRVSQQFTTLLAEWISTGGMVSTETAASASEECEKILRMVDRVGRPSYDKK
KLLLHAIISGSRRLIDRLLRELPTIFNTIEDFLWFMLSAVRESSGGSSSSVVLNGGVSSY
SLEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPGILHLSKDIGDSGFSVDSVHI
SIVLADYGILPEGSGSGQKLGVMDALAEVSSIIRQYGAEYLRHGYLSMALEYYAQAAAAV
GGGQLSWIGRASMDQQRQMTLMLKQLLTEILLRDGGISLLLGSRGAGEEGQLGRFLTDGQ
KRQEFLFEAARQCQDAGLYDKSIEIQKRIGAFSAALDTINKCLSEAICALSRGTLDGESR
ITGLIHSGNDILETFKYYPEIRPQERATVIEQQNVLRQLEAILAIYKLARSGNKLDALRE
IARLPFLPLDPRSADFTPDAFQNVSPHVEACVPGLLKDALNCLDNVTDTDGSLRAMKAKI
ANFLANNINRSWPRDLYEKIARSL
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgatgccgacatgagtggttggactggtctgctgcattcttcttccaagcta
atcgaacaagccgctccttctgctcagtttccgccgcttcagaggaatttggatcagttg
gaggctctctcgaagaagctcaaggccaaaaccctacgcgccgaagctccgtcccagtct
attgcggctactaggctattagctcgggaggggttaaatgcggagcagctagctcgtaat
ctcaagtcctttgaattaaagaccacatttgaagatgtatttcctgccgaggcaacaaca
gttgaagagtatctccaacaggtccatgaaatggcaatgctctcagctgttcaggaagct
cagaaggataatcttagaagtttcaatgattatatgatgtctgtattgcaggaggactgg
caaaaggaaaaaagagattttcttcagagcctgaatcgaatttcaatactacccaaaaca
aatgtccatgattcgagcagtggagttagtcgccagggtcaaatagtacctatgacttca
agccctgggctttcgtcaggacaatctggtgccgagctggcacttatggctgataaaccc
atagttgaaaaaaaggctgcagcatatgcagaagttgtgaagaatcttaacagtgctaga
cagcatggttcacccttcaaacctgctgcagcttttaaaagtgcatatgaaagtctgaga
attgactcatctggatcaaaatctgtcggcatgctgaagatttggcatctaattatgaca
ttaatgggtgaggacccaagtgtaaaacggagtgtttctaagagaatgtccttagtgatt
ggagctcggcaccatctggagtggggacatgagaagtatgtaatggatatgattcacagt
catcctgcgcaggctgctcttggcggggctgttggcaatctgcaaaggattcgtgccttc
cttcggatgcgtttaagggaatatggagttcttgactttgatgctggtgatacccgtcga
cagcctcctatagacaccacatggcagcagatatacttttgcctgagaactggataccat
gaagaagctctgggtgttgcacggacatctcgtgtctcccagcaattcactacgctgctt
gctgagtggatttctacgggaggcatggtatcaacagagactgcagcttctgcttcagaa
gaatgcgagaaaatactaaggatggttgatcgagttggtcggccatcatatgacaagaaa
aagttactcctgcatgctattatatctggctccaggaggctgattgacaggttgcttaga
gagctacctactatctttaatacaattgaagatttcttatggttcatgttgtctgctgta
cgggaaagctctggtggttcctcttcttcggttgtcctcaatggcggagtatcatcttac
agtttggaggatttgcaggcgtatctaaataaatttgagccatcatattatacaaagaat
ggaaaggatcctttggtttatccatatgtattacttttaagcatccagcttcttccgggc
attcttcatttgtcaaaagatattggagatagtggatttagtgttgattcagtgcatata
tcaattgtgctagctgattatggtatccttcctgaaggttctgggtcaggacaaaaactt
ggagtgatggatgccctggctgaggtgtccagcatcattaggcaatatggggctgagtat
ttgcgccatggttacctttcaatggcattagagtattatgctcaagcagctgccgccgtg
ggtggtgggcaattgtcatggattggaagagctagcatggatcagcaaaggcagatgacc
ctgatgttgaagcaacttttgacagagattcttttacgtgatggtggtatatcccttttg
cttggctcaagaggtgctggagaagaaggtcagttgggaagatttttgactgatggacag
aaaagacaagagtttttgttcgaagctgcccgacaatgtcaggatgctggtttatatgat
aaatctatagagattcaaaaaagaatcggggcattttctgctgcgctggatacaataaac
aagtgtctatctgaagctatttgtgccttatcacgtggcactctggatggtgaaagccgg
atcactggacttatacattctggaaatgatatcttggaaacattcaagtactacccagaa
atcaggcctcaggagagagccactgtaattgagcaacaaaacgtgctgaggcagcttgaa
gcaatcttagccatctataaacttgcgaggtctgggaataagctagatgcattgagggag
attgcaagacttccatttcttccactggacccgagatctgcagatttcacacctgatgcc
ttccaaaacgtgtcacctcatgttgaagcctgtgtaccaggccttctcaaagacgctctc
aattgtttggacaacgtcactgatacagatggatctctccgtgctatgaaagcgaagatc
gccaactttcttgccaacaacattaatcggagctggcctcgtgatttgtatgaaaagatt
gctcgaagcttgtga
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