Salvia splendens (scarlet sage): 121772336
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Entry
121772336 CDS
T07627
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121772336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121772336
Enzymes [BR:
sspl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
121772336
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
Other 90S particles
121772336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
121772336
NCBI-ProteinID:
XP_042025332
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All DBs
Position
16:complement(18233669..18236265)
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AA seq
275 aa
AA seq
DB search
MGRTYKMKGQKRKNKDEKYDREQSVEMAEPSKRVKTDGSGSDSEKEENLVSELPGIPIAP
LDTGSNKQRVIFVLEKASLEIAKVGKTYQLLSSDEHATFLAKNKRNPADYRPDIAFQAIQ
TILDSRVNKSGRLKALYVRTQQGLLLEIKPHARLPRTYKRFSGLMVQLLQKLHITATGNG
EKLLRLVKNPVTQYLPTNSRKIGFSHSSEKLIDMHNYVGKINEELDLVFVVGAMSHGKID
EDYVEDYISISEYPLSAAYAISIITNAVERKFKIL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggggcggacatacaaaatgaaagggcagaaaaggaagaacaaagatgagaaatacgat
agggagcaatcagtcgaaatggcggagccgtcgaagagagtgaagacggacggctccggc
tcggactctgaaaaggaggaaaatttggttagtgaattgcccgggattccgattgctccg
ctggatacggggagtaacaagcagcgagtcatctttgttcttgaaaaggcctctttggag
attgccaaagtcggcaagacttatcagctattgagttccgacgagcatgccacatttctg
gcgaagaataagcggaaccccgctgattatcgccccgatattgcttttcaggcaatccaa
acaattttagatagtcgcgtgaacaaaagtgggagactgaaagctctgtatgtaaggaca
caacaaggtcttctattggagatcaagccccacgcgcgtctgccaagaacatataagagg
ttctccggcctcatggtacaattgttgcaaaagctgcacattactgcaactggcaatggt
gaaaaacttttacgccttgtgaagaaccctgtgacccagtatctacccaccaacagccgt
aaaataggcttctctcatagttcggaaaagctgattgacatgcacaactatgttggtaaa
atcaacgaagaattggatttagtatttgtggtaggagcaatgtcccatggaaaaattgat
gaagattatgttgaagattacatttcaatctccgaatatccattgagtgctgcatatgcc
atttctattattacgaatgctgtagagcgaaaattcaagatcttgtaa
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