Salvia splendens (scarlet sage): 121772398
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Entry
121772398 CDS
T07627
Name
(RefSeq) FACT complex subunit SSRP1-like isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspl03000
]
121772398
03036 Chromosome and associated proteins [BR:
sspl03036
]
121772398
Transcription factors [BR:
sspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
121772398
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
121772398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
YL1
Motif
Other DBs
NCBI-GeneID:
121772398
NCBI-ProteinID:
XP_042025420
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All DBs
Position
16:10400699..10405404
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AA seq
644 aa
AA seq
DB search
MADGHSFNNISLGGRGGTNPGQLKVHSGGIIWKKQGGGKAVDVDKSDLLGLTWMKVPRSN
QLGVRTKDGLNYKFTGFRDQDVASLNTFFQTNFSATPGEKQLSVSGKNWGEVDLNGNTLT
FLVGNKQAFEISLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPSAQVFRDKIVSMADVGAGGEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRVFWLPKFNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDAIMDTTLSMS
EDLYNSKYKEKLDPDHKGLIHEVFITILRGLSGAKATKPGKFRSSQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHTAGGSNMHYFDFLVRLKTEQEHLFRNIQ
RNEYHNLFQFVQEKGLKIMNFNAGSVPNAEGVAAVLQSDIDDAVDPHLERIRNQAIGDES
DEEDEDFVIDKDDGGSPTDDSGGDDSDASDSGGEKEATPKKKPKKEPSAVKASSSRKKTK
DDDDDGKKKKQKKKKDPNAPKKAMSSFMFFSQAEREDVKKTNPGVAFTEVGKVLGERWNK
MTAEEKAPYEAKARADKKRYGDEISGYKNPQPMEVDSPDGSDTS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtcattcattcaacaatatctctctcggtggtcgtggaggaactaatccg
ggacaacttaaagtccactccggtgggataatatggaagaaacaaggaggtggcaaggct
gtggatgttgataaatccgatttgctgggccttacatggatgaaggtacctcgatctaac
caacttggagttcgaaccaaagatggcctcaactacaagttcaccggtttccgggatcag
gatgttgcgagccttaatacattcttccagaccaacttttcagcaactccaggggagaag
caactctctgtcagtggaaaaaattggggagaagttgatttaaatgggaatacacttact
tttcttgtgggtaataagcaagcattcgagatatctctagccgatgtagcacaaacccaa
cttcaagggaaaaatgatgtcatgctggaattccatgttgatgatacgactggtgccaac
gagaaagactcattaatggaaataagtttccacatccctaattcaaacactcaatttgtt
ggtgatgaaaatcgaccttctgctcaggtattcagagacaagattgtctcaatggcagat
gttggagcaggaggggaagaagctgttgtcacatttgacgggattgccatacttactcct
aggggacgatacagtgtcgaacttcatctttcctttttacgtctccaaggacaggctaat
gacttcaaaattcagtacagcagtgtagttcgtgttttttggttgcctaagttcaaccaa
ccacacacctttgttgtcgtgacacttgatccaccaattaggaagggccaaaccttgtat
ccacatattgtgatgcagtttgagactgatgctattatggacaccactttatcgatgagt
gaagacctttacaattccaaatacaaagaaaagcttgacccagatcacaagggactcatc
catgaggtcttcattactatactgcgtggtttgtctggtgccaaagccaccaaaccagga
aaattccgcagtagtcaggatggttatgctgtcaagtcatcgctcaaagctgaagatgga
gttctctatcctcttgaaaagagctttttctttttacccaagccacccactctaattctt
catgaggagattgactatgtggagtttgagaggcatactgctggaggctcaaacatgcat
tattttgattttctcgtcagacttaagactgagcaggagcatcttttcagaaatattcag
agaaatgagtatcacaatctctttcaatttgtccaagagaaaggtttgaagattatgaat
ttcaatgcgggaagtgtcccgaatgccgaaggagttgcagctgttttgcagagtgatatt
gatgatgctgttgatccacatctcgagagaatcaggaaccaagcaattggagatgagagt
gatgaggaggatgaagattttgttattgataaagacgacggaggctcccccactgatgac
tccgggggagatgactctgatgctagtgatagcggaggggagaaagaggcaacaccgaaa
aagaagcccaagaaggaaccttctgctgtgaaggcatcatcgagtaggaaaaagaccaaa
gatgacgatgatgatggaaagaagaagaaacaaaagaagaaaaaggatccaaatgccccc
aaaaaagcaatgagttccttcatgttcttttctcaagccgaaagagaggatgtgaagaag
actaatccaggagttgcgtttacagaagtaggaaaagtactaggagaaagatggaataag
atgacagcggaggagaaggctccatatgaagcaaaagcccgagctgacaagaaacgctat
ggtgatgagatcagtggctataagaatccacagccgatggaagtcgactcaccagatgga
tctgacacctcttag
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