Salvia splendens (scarlet sage): 121772472
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Entry
121772472 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121772472
04131 Membrane trafficking [BR:
sspl04131
]
121772472
04121 Ubiquitin system [BR:
sspl04121
]
121772472
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121772472
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
121772472
Membrane trafficking [BR:
sspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121772472
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121772472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121772472
NCBI-ProteinID:
XP_042025521
LinkDB
All DBs
Position
16:complement(26899332..26902599)
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AA seq
452 aa
AA seq
DB search
MLQIRLSKPASESGATAKPVPVDTVTVACPDHLVLADLPVAKGLGTASATAVIKSVGRRS
RRQLGERVHFCVRCDFPVAIYGRLSPCEHAFCLDCARSHSLCYLCDERIQKIQTIKLMEG
IFICAAPRCLKSFLKKSEFEMHINDVHADLLHPNKEKEGNESEAMSARKPSASDTTVQAP
LRPIFSPLSSSQVHDREDKAQLPQSRDQPPLKPAAQQRPTPSFPGQAPDHPSEHPDGIPS
HPFDRATSQNHFPRQTFEGHGQSGSRQDSVNPNSGPAPPQYGYPPYAADGMQPYFGAPYG
MPRPDSAPEGGQGQGSLLGFPPSPAGPMNFPQNYPQWNAVPGSVPLEPPMVSQGSMDGFM
NVDPQGRGFFQNDYGQNAGNKSLEQQRQGGNFVDPRDGKGILAPQPLHLPPPPLRPPPHL
PQGSSYSGDGNHDGPPGFSWPAERRDSFGGGE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagattcggctgagcaagccagctagtgaaagcggtgcgactgcgaaacctgtg
cctgtggacactgttactgtcgcttgccccgatcatcttgtgctagctgatcttcctgtg
gcgaagggtttgggtacagcatctgcaaccgctgttatcaagtctgttggacgccgctcc
cgtcgccagctcggtgagcgtgttcatttctgtgttagatgcgattttccggttgctatt
tatgggcgtctgagcccatgtgagcatgccttctgtttggactgtgccaggagtcattct
ctttgttatctttgtgatgaacgcatccagaagattcagacaatcaaactgatggaagga
atcttcatatgtgctgcccctcgttgtctcaagtccttcttaaagaagagtgaatttgag
atgcatataaatgacgtccatgctgatcttcttcaccccaataaggagaaagaaggaaat
gaatcagaagcgatgagtgctaggaaaccttcagcctcggataccactgttcaagcaccc
ctgaggccgattttctctcccctttcaagttctcaagttcatgatcgcgaagacaaagcc
cagctgcctcaatccagggatcaaccacctttgaaacctgctgcacagcaaaggccaaca
ccatcttttccgggacaagctccagatcatccatcagagcaccctgatggtattccatca
cacccctttgatagagctacttcccagaaccactttcctaggcaaacttttgaaggtcat
gggcagagtggtagtcgacaagattcagttaacccaaactcaggtccagctccacctcaa
tacggttatcctccttatgcagctgatggaatgcaaccgtactttggtgcaccatatgga
atgccaagaccagactctgcaccagaaggtggacaaggacagggctcgttgcttggtttc
cctcccagtcctgctggacccatgaattttcctcaaaattatccacagtggaatgcagtt
cccggttctgtgcctttggaacctcctatggtatctcaaggatctatggatggctttatg
aatgtcgatcctcaaggaagaggattcttccagaatgattacggacagaatgctgggaat
aagagtttggagcaacagaggcagggtgggaattttgtggacccaagggatggtaaagga
atattggctccccaaccgcttcatcttcctcctccacctctaagacctcctccccatctg
cctcaaggcagctcatactctggtgatgggaatcatgatggacctccgggcttcagctgg
ccagcagagaggcgggatagcttcggaggtggggagtag
DBGET
integrated database retrieval system
