Salvia splendens (scarlet sage): 121772502
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Entry
121772502 CDS
T07627
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121772502
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
121772502
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_15
RsgA_GTPase
AAA
ORC-CDC6-like
nSTAND3
NACHT
AAA_23
AAA_24
SRP54
AAA_5
TsaE
Pox_J1
VHL_C
Motif
Other DBs
NCBI-GeneID:
121772502
NCBI-ProteinID:
XP_042025563
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All DBs
Position
16:2135993..2140072
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AA seq
538 aa
AA seq
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MSDQKRARIASDEDTIHCFGPDSFKLHSLPAPRAGQVLGLVGINGIGKSISLRLLSGKFK
FNLGRLNNPPDWQEILDHFKGSELHDYFMRIYVDKLNVICKPQYVEYLPKHVQGNVGQRL
SLADKVKDMKQELAADLDLIQVMDRNVEDLSRGELQRFVIAITALQNPDIFLFDEPSSYL
DVKQRLKAAQIVRSLVRPNNYVIVAEHDLSVLDYLSDSICCLYGEPGVYGVVTLPFSVRE
GINIFLARCVPTENLGFKYKPFMVAEIPQESSVDIETCARYKYPTMTKTLGNFKLKVVEG
EFIDSQIIVMLGENGTGKTTFLRMLAGLLKPDLVQGSDIEISEYNFSYKQEIIGIKLEYE
CTVGMWLLAKIPDAISDHLFITNVFEPLLIQELRDKEVGDLSGGELQRVALTICLGKPAD
IYLIDEPSTYLDSENCIVAANVIKNFIRHTKKSALVVEHDITMATYLADRVIVYEGKPSI
DCVASPPQSLLTGMNLFLSHLDITVRIDPANMLPRFNKHESKEDREQKAAGSYYYMDD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcagaaacgggcgcgtattgcctccgacgaggatacgatccattgttttggg
cctgactcctttaaattgcacagtttacctgcaccgagagctggccaagttttgggcctc
gtgggaattaatggcattggaaaatctatttcacttagacttttgtctgggaagttcaaa
tttaacttgggacgccttaacaatccccctgattggcaagaaattttggatcattttaaa
ggatcagagctgcacgattacttcatgcgtatttatgtagataaattgaatgtaatctgc
aagccccagtacgttgagtacctacctaaacatgttcaaggcaacgttgggcaacgtctt
tctctggcagataaggtgaaagatatgaaacaagaacttgctgctgaccttgatttgatt
caggttatggaccgtaatgtggaagatttatctcgtggagagcttcagaggtttgtgata
gctatcactgctctacagaatccagatatctttctattcgatgagccatcgagttatctt
gatgttaaacaaagactaaaagctgcccaaattgtcagatccttggttcgacctaataac
tatgtgattgtggcagagcatgatcttagtgtgctcgattatttgtcggactccatatgc
tgcctttatggggaacctggtgtatatggtgtagttactcttccattctctgttagagaa
ggaattaatattttcctggctcgatgtgtgccaaccgaaaatcttgggtttaaatacaaa
ccttttatggttgcagagattccacaagaaagttctgtggatattgaaacatgtgcaaga
tacaagtatccaaccatgactaaaactctgggaaacttcaagctcaaggttgttgagggt
gaattcattgattcacaaattattgtgatgctcggagaaaatgggacaggaaagacaacc
ttcctacgcatgctggctggccttttaaagcctgatttagtacaaggatctgatatcgaa
atatcagagtacaatttctcttacaagcaagagataatcggtattaaactggagtatgag
tgtaccgtcggaatgtggttgcttgcaaaaattcctgatgcaatcagtgatcatcttttc
ataaccaatgtgtttgaacctctattgattcaagaacttagagataaagaggttggggat
ctttctggtggagaattgcagagggttgctctcactatttgtcttggaaagcctgctgat
atatatctgatagatgaaccaagtacatatcttgactcagagaattgtattgttgctgca
aatgtcatcaagaatttcatacgccacacgaagaagagtgcattagttgtggagcatgat
ataaccatggcaacataccttgctgatagggtgatcgtgtacgagggaaagccatcgatt
gattgcgttgccagtccacctcaatcgctattgactggaatgaaccttttcttatctcac
ttggatatcacagtcagaattgaccctgcgaatatgctgcctagattcaacaaacacgag
tcaaaagaggaccgggagcagaaggccgctggatcttactattatatggatgactaa
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