Salvia splendens (scarlet sage): 121772603
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Entry
121772603 CDS
T07627
Name
(RefSeq) probable pectate lyase 9 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl00040
Pentose and glucuronate interconversions
sspl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
121772603
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
121772603
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
121772603
NCBI-ProteinID:
XP_042025706
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Position
16:1805691..1807314
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AA seq
384 aa
AA seq
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MPSRAMQGITLCLIRAISIAILLSSGRVEARRTIDNMNVIDKCWRMNPDWRRNRQQLATC
AVGFAGQMFNNIGDDVINYKVTDPSDDPLSPRPGTLRHAMTSITGKIWITFKRHMNITLS
KPLLVSSLTTIDARGANVHIANGGCLLIKKAINVIIHGLYIHDCKPQEPGPVKGPGGEIM
HLGPTDGDAIRIVSSSRIWIDHNTMYDSEDGLIDVTRGSTDITISNNWFRFQDKVMLLGH
DDGFRRDKDMRVTVAFNHFGPNCVQRMPRIRFGYAHVVNNLYLGWGIYAIGGSMNPSIKS
QANLFIAPKGGNKEITWDSGLTGNFKSIEDVFENGASFTTTVDAGATMRPSYAPDQMFEV
EDGLRVRDLTKSAGVLKCPKIARC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaagggccatgcaaggcatcaccttgtgtttgatccgggctatctcaatagcc
atcctattgagttcaggccgggtcgaggcccgaagaactatcgataacatgaatgtcatc
gacaagtgctggagaatgaacccagactggcggagaaaccgccaacaactagctacgtgt
gccgttggattcgcgggacaaatgttcaacaacatcggagacgacgtgatcaactacaaa
gtaacggaccctagcgacgaccccttgagcccgaggcccggtacattgaggcatgccatg
acaagcatcacaggcaagatttggatcacattcaagaggcacatgaacattacactttcc
aaacccctccttgttagtagcttgacaacaattgatgcaagaggtgccaatgtccacatt
gcaaatggtggatgcctacttattaaaaaggccattaatgtgattatccatggcctctac
atccatgactgcaagccgcaagagcccggcccggtgaagggtccgggaggggagatcatg
catttgggcccaacagacggggacgcgatcaggattgtgtcgtcttcgaggatatggatc
gatcataacacaatgtacgacagtgaggatgggttgattgatgtcacaagaggatcaaca
gacatcaccatatcgaacaactggtttaggtttcaagataaagtgatgcttctcgggcac
gatgacggctttcgaagggataaagacatgagggtcacagttgccttcaaccatttcggc
ccgaactgcgtacaaagaatgccaaggattcgatttggatatgcacatgttgttaacaac
ctttacctaggatgggggatatatgcaattggagggagcatgaaccctagcatcaagagc
caagcaaacctcttcattgcgccaaagggaggcaacaaggagataacatgggatagtggt
ctcaccggcaacttcaaatctatagaggatgtgttcgagaatggagcctcgttcacgaca
acggtcgatgcgggtgccacaatgaggccaagctacgcaccagatcaaatgtttgaagtt
gaagatgggttgagagtgagggacttgacaaaatctgctggtgttttgaaatgtcctaaa
atagctagatgctaa
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