Salvia splendens (scarlet sage): 121773228
Help
Entry
121773228 CDS
T07627
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
121773228
Enzymes [BR:
sspl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
121773228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
121773228
NCBI-ProteinID:
XP_042025977
LinkDB
All DBs
Position
17:8928110..8934467
Genome browser
AA seq
679 aa
AA seq
DB search
MGRKIQCSWKLSWMALLLLLQIFLLTQCSASRWQKVKKNETDGDTYYPPVKMHDFDDHVV
LDNGILNVTLSTPEGMITGITYNGIQNLLKQEYNENNRGYWDLVWSSPDHPKEIFDRLDG
TNLFVVHEDEEQVELSFVRTWDSSQTGVPPLNIDKRFIMLRGCPGFYSYAIFEHLQDWPD
LHLSQGRIVFKLQENIFQYMAISDDRQRIMPTSENRNRSQVLDYPEAVLLSNPSNAFLTG
EVDDKYQYSSDNKDSLVHGWIAPDLTTGFWIITPSNEFKTAGHMKQDLTSHAGPIALSMF
FSAHYAGLPLELEFRGGEPWKKVFGPVFVYLNSVQPGQDPLALWPDAKQQMLVETQHWPY
DFLASDDFPRAKQRGRVSGRLLVRDSFINKRLMTASNVYIGLASPGDPGSWQRESKGYQF
WSQCDALGYFKINNIRAGNYSLYAWVPGIIGDYKYNVPINIEPGSKIRLKNLVYDPPRDG
PTVWEIGVPDRSAAEFYVPDPNPSLMNQLYNVHPDRFRQYGLWDRYTDLYPDEDLVHSVE
TSVYQTDWYFAHVNRNIGNKTYVPTTWRVLFNLTDVDTSANYTLRIALASASDAELQVRI
NAEVGEAPCFTTGLIGKDNSIARHGIHGLYWLYSASVRGCVLVCGQHAMLLTQLRGSSPW
RGIMYDYIRLEGPSSNIQT
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagatacaatgtagttggaagttgagttggatggctcttcttcttcttctt
caaatattcttgcttacacaatgttctgcatcaagatggcaaaaggttaaaaaaaatgag
accgatggcgatacatattaccctccagtaaagatgcatgatttcgacgaccacgtagtg
ttggacaatggcatcctcaatgtgactctgtcaaccccagagggcatgatcactggaata
acctacaatggaattcagaatctactcaaacaagagtacaatgaaaacaacagagggtat
tgggatcttgtttggagctcacctgaccaccctaaagaaatttttgacaggcttgatggg
actaatctctttgttgtacacgaagacgaagaacaagtggagctctcgttcgttcggact
tgggattcttcgcagacaggggttcctcccctcaacattgacaaaaggttcataatgctg
cgcggttgccctggattctactcgtatgcaatattcgagcacctccaagactggccggat
cttcacttgtctcaggggaggatagtgtttaagctacaagaaaatatctttcaatacatg
gcaatatcggacgacagacagaggattatgccaacgagcgaaaaccggaacagaagccag
gttctagactacccggaagctgttctattatcgaatccaagcaacgctttcctcacagga
gaggtggacgacaagtaccaatactcaagcgacaacaaggacagtctggtccacggctgg
atagccccggaccttactacagggttctggatcatcaccccgagcaacgagttcaagacg
gccgggcacatgaagcaggacctcacctcgcacgccggcccaatcgccctgtctatgttc
ttcagcgctcactatgccggcctgccgctggagctggagttccggggtggcgagccgtgg
aagaaggttttcggacccgtgttcgtctacttgaactcggtccaacccggccaagatccg
ctcgcattgtggcctgatgccaagcaacagatgctcgtagaaacgcaacattggccgtac
gatttcctggcgtcggacgacttccctcgtgccaagcagagaggcagagtaagcggccgg
ttacttgtccgcgacagttttatcaacaaacgccttatgaccgctagcaatgtgtacatt
ggacttgcttcccccggggatccaggatcatggcagagagaaagcaagggctatcagttc
tggagccaatgtgatgctttaggatacttcaaaatcaataacatcagagctgggaactat
agcctctatgcttgggttcccgggatcattggagactacaaatacaatgttccgatcaac
atcgaaccaggaagcaagattaggctgaaaaatcttgtgtatgatcctccgagggacggg
cctacagtgtgggaaatcggggtccctgaccgttcagctgctgagttctacgtgcctgat
ccaaacccgtctctcatgaaccagctctacaatgtccaccccgacagattcaggcagtat
ggcttgtgggatcgttacaccgatctgtatccggatgaggatttggtacattcagtcgaa
acaagcgtttatcagactgattggtactttgctcatgtgaatagaaacatagggaacaaa
acctatgtcccaacaacatggagggttctattcaacctcacagacgtcgacacttcagca
aactacaccctgcggattgcactggcctcggccagcgatgctgagctgcaggtgaggatc
aacgcggaggtaggagaggctccatgttttacgacggggctaattgggaaggacaattcg
attgctagacatggaatccatggactgtattggctttatagtgcgagtgtaagaggttgt
gttcttgtttgtgggcaacatgcaatgttgttgactcaattgagaggatctagcccttgg
agagggatcatgtatgattatattcgtctagagggtccatcttcgaatattcagacatga
DBGET
integrated database retrieval system
