Salvia splendens (scarlet sage): 121773251
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Entry
121773251 CDS
T07627
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121773251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121773251
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121773251
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121773251
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121773251
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121773251
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121773251
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121773251
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121773251
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121773251
Exosomal proteins of other body fluids (saliva and urine)
121773251
Exosomal proteins of breast cancer cells
121773251
Exosomal proteins of colorectal cancer cells
121773251
Exosomal proteins of bladder cancer cells
121773251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121773251
NCBI-ProteinID:
XP_042025995
LinkDB
All DBs
Position
17:2186284..2190285
Genome browser
AA seq
582 aa
AA seq
DB search
MSLPFSSPIFSHCDVSGLRGKSNPNGLWQRNRVRQTMLVVKAGPKRIEFDKKCRDALLSG
INKLADAVSVTLGPKGRNVVLSESKKLKVINDGVTIARAIELPDTIENTGVLLIQEVATK
TNGSAGDGTTTAILLAREMIRYGLLAITNGANPVSLKKGMERAVEELVKVLRERSYAVRG
SDEIKAVASLSAGNDEYVGNLIAGAIEKIGPDGVISIESSSSSETSVTVDEGMKIDKGYM
SPHFVTNKDKSIVEFENARVLVTDLQISSVKEIVPLLEKSTQLSVPLLIFAEDISRQVLE
TLVLNKMQGVLNVAVVKCPGLGEGKKAILQDIALMTGADFISGDFGVALETATSDQLGVA
RKVTITSNFTTIVADPSTKAEILARIMQIKKDLAETDSKYLAEKLSGRIAKLCGGVAVIK
VGAHTEVELEDRKLRIEDAKNATFAAMAEGVVPGGGATYIHLSKQIPVIKEAFEDPDEHI
GADIVGKALLAPAKVIAANAGVDGDVVVEKIKACDSNFGYNAMTGRYEDLIAAGVIDPCR
VSRCALQNAVSVAGVILITQAILVEKIKKAKPPVPQIPGISP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgccattttcttcaccgatcttctcacattgtgatgtttcaggattacgtgga
aaatcaaatccaaacgggctatggcagagaaacagagtgaggcaaacgatgttagtggtg
aaagcaggccctaagagaatcgaatttgacaaaaaatgcagagatgctttactttcgggg
atcaataagctcgctgatgctgtttctgtgactttgggaccgaaagggcgaaatgttgtc
ctttcagagtccaagaaactcaaagtgatcaatgatggtgtaactattgcccgggccata
gagctccctgacacaattgagaatactggagtgctgctaatccaagaggttgcgaccaaa
accaatggttcagctggtgatggcacgacaactgcgatcttgttggcccgagaaatgatt
agatatggattattagctatcactaatggggctaaccctgtatcgttaaagaaaggaatg
gagagggcagtggaagaattggtcaaggttttgagagagagaagttatgctgtaagaggg
agtgatgaaattaaagctgtagcttcgttgtctgctggaaatgatgaatatgttggaaac
ttgattgccggagctattgagaaaattggccctgatggtgtgatatcaattgaatcttct
tcgtcatctgaaacttctgtaacagtcgatgaaggaatgaagatagataaaggatacatg
tcaccacactttgtgacaaataaggataaatcgatagtggaatttgaaaatgcgagagtt
ctggtgaccgatctacagatatccagtgtgaaggagattgttccgttactggagaagtct
acacaattgagtgtccctctactgatttttgctgaagacatatctcggcaagtgctggaa
actctagtcttgaacaaaatgcaaggcgtgcttaatgtcgccgttgtaaaatgtccaggg
cttggagaaggaaagaaagctatattgcaagatattgctcttatgacaggagctgacttt
atatccggagattttggggtggctcttgaaacagcaacttctgatcagcttggtgttgct
cgaaaagtgacaatcactagcaattttaccaccatagtggcggatccatcgacaaaagct
gaaattctggccagaataatgcagataaaaaaggatctcgctgaaactgatagcaaatat
ctagcagaaaagctaagtgggcggattgcaaagctctgtggcggggtggctgttattaag
gttggtgctcatacagaagttgaacttgaagaccgaaaactacgaatagaagatgctaaa
aatgccacgtttgcggccatggctgagggagtggttcctggtggtggggccacctacata
catctctcaaagcaaatacccgtgatcaaggaggcctttgaggaccctgacgagcacatt
ggtgcagacattgttggaaaggcacttcttgcaccagcaaaagtaattgcagcaaatgca
ggggttgatggagacgtggttgtggaaaaaattaaagcttgtgattcgaatttcgggtat
aatgcaatgactgggagatacgaagatctaattgctgctggtgtcattgacccttgccgg
gtctcaagatgcgcccttcagaatgccgtttctgttgctggtgtgatcctaatcactcaa
gccatactagtcgagaaaatcaagaaggccaagccacctgttccccagattcccggtata
tccccttga
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