Salvia splendens (scarlet sage): 121773329
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Entry
121773329 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121773329
09124 Replication and repair
03420 Nucleotide excision repair
121773329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121773329
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121773329
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121773329
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121773329
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
CUE
TECR_N
Crinkler
Rad60-SLD_2
Ubiquitin_4
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
121773329
NCBI-ProteinID:
XP_042026091
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Position
17:7690007..7694149
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AA seq
379 aa
AA seq
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MKIFVKTLKGSQFAIEVKPNDSVADVKKNIETVQGSAVYPAAQQMLIYQGKVLKDETTVE
HNEVAEGSFVVIMLSKNKSSQSGSSASAAPSSTVQPASGTPSAQPVAAASADPSTLAPQQ
SEPESASFPAPNPAASVGVYDQAASNLVAVTNLDGTVQQILDMGGGSWDRDTVIRALQAA
YNNPERAVEYLYSGIPEQVEVAPVAQPPAGAQPVVTSIYDTQPAVPSGGPNANPLDLFPQ
GLPTMGSNAGAGSLDFLRNSQQFQALRAVVQANPQILQPMLQELGKQNPQLVRLIQEHQA
DFLQLINEPVEEGEGNILGQLADAMPQAVTVTPEEGEAIARLEAMGFDRALVVDVFFACN
KNEELAANYLLDHMHEFDD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgttaaaactctcaaaggctcgcagttcgcgatcgaagtgaaacctaac
gactccgtggcagatgtgaagaaaaacattgaaacagttcagggctctgctgtctacccc
gcagctcagcagatgcttatctatcaagggaaagttctcaaggatgaaacgacagtagag
cataatgaagttgctgagggaagttttgttgtgattatgttgtccaagaacaagagttcg
cagagtggatcatctgcatctgctgccccatcgagtacagtgcaacctgcaagtggcact
ccatcagcacaaccagttgcagcagcgtctgcagatccatctactcttgcacctcaacaa
tcagaacctgaatctgcttcttttcctgcgcctaaccctgctgcctcagtaggcgtctat
gatcaagcggcatccaatcttgtagctgtaactaacttggacggtactgttcagcagata
ctagatatgggtggaggaagctgggaccgagatactgttatccgtgcactacaggctgca
tataataatccagagcgagctgttgaatacctctattctggtattccagagcaagtagaa
gttgctcctgttgcgcaacctcctgctggtgcccagcctgtggtcacttcaatttatgat
acacagccagctgtaccttccggtggaccaaatgctaatcctttagatcttttcccacag
ggtctcccaactatgggctcaaatgcaggtgctggaagcttggattttcttcgcaatagt
caacagttccaagccctgcgagctgtcgtgcaagccaatcctcaaatcttgcagcctatg
cttcaagagcttggaaagcaaaaccctcagctggttcggctgattcaggaacatcaggct
gacttcctacagctaataaatgaacctgttgaggagggggaagggaacatattagggcaa
cttgctgatgcaatgccacaggctgtaactgttacaccagaagagggtgaagcaattgca
cgtctcgaggcaatgggtttcgatcgtgcgttggtagtggatgtattctttgcctgcaac
aaaaatgaggagcttgcggccaactacctattagaccacatgcacgagtttgatgactga
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