KEGG   Salvia splendens (scarlet sage): 121773329
Entry
121773329         CDS       T07627                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03420  Nucleotide excision repair
sspl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121773329
  09124 Replication and repair
   03420 Nucleotide excision repair
    121773329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sspl03051]
    121773329
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121773329
Proteasome [BR:sspl03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    121773329
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      121773329
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD UBA_7 UBA_RAD5A CUE TECR_N Crinkler Rad60-SLD_2 Ubiquitin_4 Dsc3_N
Other DBs
NCBI-GeneID: 121773329
NCBI-ProteinID: XP_042026091
LinkDB
Position
17:7690007..7694149
AA seq 379 aa
MKIFVKTLKGSQFAIEVKPNDSVADVKKNIETVQGSAVYPAAQQMLIYQGKVLKDETTVE
HNEVAEGSFVVIMLSKNKSSQSGSSASAAPSSTVQPASGTPSAQPVAAASADPSTLAPQQ
SEPESASFPAPNPAASVGVYDQAASNLVAVTNLDGTVQQILDMGGGSWDRDTVIRALQAA
YNNPERAVEYLYSGIPEQVEVAPVAQPPAGAQPVVTSIYDTQPAVPSGGPNANPLDLFPQ
GLPTMGSNAGAGSLDFLRNSQQFQALRAVVQANPQILQPMLQELGKQNPQLVRLIQEHQA
DFLQLINEPVEEGEGNILGQLADAMPQAVTVTPEEGEAIARLEAMGFDRALVVDVFFACN
KNEELAANYLLDHMHEFDD
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaagattttcgttaaaactctcaaaggctcgcagttcgcgatcgaagtgaaacctaac
gactccgtggcagatgtgaagaaaaacattgaaacagttcagggctctgctgtctacccc
gcagctcagcagatgcttatctatcaagggaaagttctcaaggatgaaacgacagtagag
cataatgaagttgctgagggaagttttgttgtgattatgttgtccaagaacaagagttcg
cagagtggatcatctgcatctgctgccccatcgagtacagtgcaacctgcaagtggcact
ccatcagcacaaccagttgcagcagcgtctgcagatccatctactcttgcacctcaacaa
tcagaacctgaatctgcttcttttcctgcgcctaaccctgctgcctcagtaggcgtctat
gatcaagcggcatccaatcttgtagctgtaactaacttggacggtactgttcagcagata
ctagatatgggtggaggaagctgggaccgagatactgttatccgtgcactacaggctgca
tataataatccagagcgagctgttgaatacctctattctggtattccagagcaagtagaa
gttgctcctgttgcgcaacctcctgctggtgcccagcctgtggtcacttcaatttatgat
acacagccagctgtaccttccggtggaccaaatgctaatcctttagatcttttcccacag
ggtctcccaactatgggctcaaatgcaggtgctggaagcttggattttcttcgcaatagt
caacagttccaagccctgcgagctgtcgtgcaagccaatcctcaaatcttgcagcctatg
cttcaagagcttggaaagcaaaaccctcagctggttcggctgattcaggaacatcaggct
gacttcctacagctaataaatgaacctgttgaggagggggaagggaacatattagggcaa
cttgctgatgcaatgccacaggctgtaactgttacaccagaagagggtgaagcaattgca
cgtctcgaggcaatgggtttcgatcgtgcgttggtagtggatgtattctttgcctgcaac
aaaaatgaggagcttgcggccaactacctattagaccacatgcacgagtttgatgactga

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