Salvia splendens (scarlet sage): 121773736
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Entry
121773736 CDS
T07627
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121773736
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121773736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_LRRK2
TAF1C_beta-prop
DUF5672
Motif
Other DBs
NCBI-GeneID:
121773736
NCBI-ProteinID:
XP_042026585
LinkDB
All DBs
Position
17:12470020..12473776
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AA seq
511 aa
AA seq
DB search
METSRSQSFFLDLKLREVNGFRVRKRPYIGNDSLGFDPIGAVAIEHDGEPSPPMALSFCK
TSKNAHILALADEAGYVTLTDTRKKLLDNDSFQENAEKAKVTEWVAHENAVFDLCWIKDD
ANMLTASGDQSIKIWDTQERKCIRALLGHTGSIKSISCHPSNQELVVSGSRDGSFAVWDT
RCSKSVHNSRVQPLSIVQEAHTSSGRRRCRRGKAESMSITSVLYLKDEVSLATAGAVDSI
IKFWDTRYLKAPVTQACPKSESSTEEKRLHGISSLSQDLNGMFITASCMDHRVYLYNVLQ
LEKGPIKTFSGGRTESFFVKSAISPDAAHILSGSSDGNAYIWQVDKPQMDPIVLKSHDGE
VTAVNWCPSEMGKVATCSDDFTVRLWNIQSSCYSNMRSPSSLRKRVRALPRVERRKLFAD
EPSNSKSNEDTNSRTPITMPEMRTPESQKKLSFSFEVKQDLVRTPETEARSPSSVLNPPP
SLKRKTIRDYFPVPFNKLSSAKSSFPECTDQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccagatctcaatcatttttcctagacttgaagcttagagaagtcaatgga
ttccgagtacgaaagcggccgtatatcggaaacgattcgctaggttttgacccaatcgga
gctgtagcgatcgagcacgatggcgagccttcgcccccaatggctctgtctttctgcaag
accagcaaaaatgcgcatattcttgctctagctgatgaggcggggtatgtcacattgact
gatacgaggaagaaattattggataatgattcgttccaagagaatgcagagaaggctaag
gtgactgagtgggtagctcacgaaaatgctgtatttgacttatgctggattaaggatgat
gcaaatatgttaaccgcctcaggagatcaaagtattaagatttgggacacacaagagcgt
aagtgcataagagctttgctgggacacactggaagtattaagtccatcagctgccaccct
agtaatcaggagttagttgtctctggttcaagagatggatcgtttgctgtatgggatacc
agatgctccaagagtgtccacaattcacgtgtacagcctttatctatagtgcaagaagca
catacttcttcaggtcgaagacgctgcaggcgtggaaaggctgaatcaatgagtatcaca
tcagtgctttatctcaaagatgaagtttctcttgcgactgctggagcagttgacagcata
attaagttctgggacacacggtatctcaaagctccagttactcaagcatgtccaaagtca
gaatcatcaaccgaggaaaagagattacatggcatatctagcctgtctcaagacttaaac
gggatgtttatcactgcctcatgcatggatcacagggtttacctgtataatgtgcttcag
cttgagaagggcccaataaaaacattttctggaggccgaactgagtctttctttgtgaaa
tcagcgatcagccctgatgcagctcacatactcagcggttctagtgatgggaatgcctac
atatggcaggtggacaaaccccagatggatcctattgttttgaaaagccatgacggagaa
gtcacagcagtaaactggtgtccatcagagatggggaaagtggcaacttgctcagacgat
ttcacagttcgtctttggaacatccaaagcagttgctattcaaatatgcgatctccttcg
tcactgagaaagagagtccgggctcttccaagggtggagaggcgaaaactgttcgcagat
gagccatcaaactcaaaaagcaacgaagacaccaactcccgtactcccataacaatgcca
gaaatgaggacaccagaatcccagaagaagttgtcctttagttttgaagtgaaacaggac
ttggtgagaactccagaaactgaagccagaagcccttcttcagttctaaaccctcctccc
tcgctgaaaaggaaaaccatccgagactattttcctgttccatttaacaaactctcttct
gctaagtctagctttccagagtgcacggatcaataa
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