Salvia splendens (scarlet sage): 121773821
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Entry
121773821 CDS
T07627
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-like isoform X1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121773821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121773821
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
121773821
Complex B
121773821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
121773821
NCBI-ProteinID:
XP_042026669
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All DBs
Position
17:18292215..18296827
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AA seq
224 aa
AA seq
DB search
MILYINYYLAIEERIRQYQYQIFSSGVHFLNHQCVDQLHCKPSVRKQHNSGYKHKANIRS
YYQKFEEQQTQILIDQKIKEHLGQTVVYQQIGAAYNQHLAAFPGARPRLPVMPPPMFPGP
PQMVPGMRPPMLPIPVPGAPGYGNSPMVPMQPQPAPSLPPQSSGLPPPPSTSAPSPVPGG
GQPPSSSGAPPPNATQMYNVNPPGTSAASAPAGGYSYPQYSQTG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgattctatatatcaattattatttggcgattgaagaaaggattcgacaatatcagtat
cagatttttagctccggagtgcattttctaaatcatcaatgcgttgatcaactgcattgc
aaaccttctgtcagaaagcagcataattctggctacaaacataaggcaaacataagatcc
tactaccaaaagtttgaggaacaacaaactcagattttgattgatcagaagatcaaggag
catcttggacagacagtagtatatcaacagattggtgcagcttataaccaacatcttgct
gcttttcccggagcaaggccgcgcctacctgtcatgccgcctcctatgtttccgggacct
cctcagatggttcctggtatgaggcctccaatgctgcctataccagttcctggtgctcct
ggttatggaaattctccaatggtcccaatgcagcctcagcctgctccttcgttgcctcca
caatctagtgggcttccacctccaccaagtacgagtgcgccatcaccagttcctggagga
ggccaaccccctagctctagcggtgcgccaccacctaatgctactcaaatgtacaatgtg
aatccacctggaacttctgctgcttctgcacctgctggtggctattcttatccacagtac
tctcaaaccggttaa
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