Salvia splendens (scarlet sage): 121773885
Help
Entry
121773885 CDS
T07627
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121773885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121773885
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121773885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
Suf
HAT_PRP39_C
HAT
Motif
Other DBs
NCBI-GeneID:
121773885
NCBI-ProteinID:
XP_042026743
LinkDB
All DBs
Position
17:3886335..3889538
Genome browser
AA seq
634 aa
AA seq
DB search
MADVVQFKLERMLDELDDLERRGLFSRREIAEIVKMRRKFEYRLKRPSPLKEDFLTYIDY
EKQLDALRALRKKSLERKSGGDKSKKTISDYAGVTRILLIYRLATNRFKGDIELWFQYLE
FCRARGHGRMKKALAQLVRFHPKVPCVWIYAAAWEFDNNLNVAAARALMQNGLRSCPASE
DLWVEYLRMELTYLNKLKARKIALGEGKASGKRNADEQQWREENQDLFMSLDENVDKISS
SQEKPDVFREHGLTLLDTVYSGAIEALPTSFSLRTRFLDILEATELVSSEEMRTKIHHDM
KRDFSKDPQYWDWLARVEIADTKGVNSVQLGRAVQVYEEGLKSTPSPIMVELYLKFLMEA
VDRDGEGVIQFDTHAPAIEIVSHILEVFEKAESLGCINEDLACQHVSYLLHLSKLVEAKM
LAEKLCSGEFPNAVNLWTLRLTIEMRCIQNKSLTPSKADMLYIFELLRNILKKLSVSEAE
SLWTMGLKYFANQRRHFDELVEMSVLLLAKDGGNDSGFSLSSTIVNYVLQRDGVERAREM
YKRFLALPHPGLQLYRDCIELESNLASVGDKTGLTNARKLYESALTTYDQDANLWRDYHC
LEIKTGTSETAAAVHWRARKTLKNNAAQLLSSKS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgttcaattcaagctcgagcgcatgctcgacgagctagacgacctagag
cgccgcggtttgttcagccgccgcgagattgccgagatagtcaaaatgcgccgcaaattc
gagtaccgcctcaagcgtcctagtcccctgaaggaagactttttgacctacatagactac
gaaaagcagctcgacgccctccgcgccctccgtaaaaaatctctcgagaggaaatccggc
ggcgataaatcgaaaaagacgatctcggattacgccggcgttaccaggattctcctcatt
taccggctcgccacgaatcggtttaagggagatatcgagctatggtttcagtacctcgaa
ttttgcagggcgcgaggtcacggcaggatgaaaaaagcattggctcaattagtcagattt
catccaaaagtaccttgtgtgtggatatatgctgcggcttgggagttcgacaacaatctg
aatgttgctgctgcccgtgctctgatgcaaaatggtttgaggtcctgtccagcttctgag
gacctatgggtggagtatcttcgcatggaactcacataccttaacaagttgaaagctcga
aagattgccttaggtgagggtaaagctagtggcaagaggaatgctgatgagcaacagtgg
agagaggagaaccaggacttgttcatgtctttggatgagaatgtggataagatatccagc
tctcaagaaaaaccggatgtgttcagggagcatggcttgaccctccttgatactgtctat
agtggtgcaattgaagccttaccaacttccttcagtctaagaactcggtttctggatata
cttgaagcaacagagttggttagttcagaagaaatgcgaacaaagatacaccatgacatg
aaaagggatttttcaaaggatcctcagtactgggactggcttgctagagttgaaatagct
gataccaaaggagtaaattctgtgcagttaggccgagcagttcaggtttatgaggagggt
ttaaagtctacgccatcacctatcatggttgaactttatttaaagttcctcatggaagca
gttgatagggatggagaaggtgtcattcaattcgacacgcatgctcctgccattgagatt
gtttcacatattttggaagtatttgagaaagcagagagccttggctgcattaatgaagat
cttgcttgccaacatgtttcatatcttttacacttaagtaaactggttgaagccaagatg
cttgctgaaaaactctgctctggagagtttccaaatgcagtgaatttatggactttacga
ctcaccatagaaatgaggtgtattcagaataaatctctcacaccgagcaaggctgatatg
ctctatatcttcgaactgctgagaaatattctgaagaaacttagcgtttcagaagcagag
agtttgtggactatggggctgaaatattttgcaaatcagagacgtcattttgacgagctt
gttgagatgtcagttctattattggccaaagatggtggaaatgatagcgggttttcactc
tcatcaacaattgtaaattatgtacttcaaagggatggagttgaacgtgcaagagagatg
tataagagatttcttgcattaccacatcctggacttcaattatacagagattgtatcgag
ctagagtcgaaccttgcatctgtgggtgataagacaggtctgaccaatgctcggaagcta
tatgaatctgcacttacaacttatgaccaagatgcaaacctatggcgtgactatcactgc
ttggagataaagacgggaacttcagaaactgccgcagctgttcattggcgtgctagaaaa
acccttaaaaacaatgcagcccagctcctatcttcaaaatcatga
DBGET
integrated database retrieval system
