Salvia splendens (scarlet sage): 121774249
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Entry
121774249 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121774249
09124 Replication and repair
03420 Nucleotide excision repair
121774249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121774249
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121774249
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121774249
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121774249
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Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
UBA_7
UBA_Ucp12
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
121774249
NCBI-ProteinID:
XP_042027089
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All DBs
Position
17:7713206..7715041
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AA seq
252 aa
AA seq
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MDQKLKVNSVGVYDQAASNLVAVTNLDGTVQQILDMGGGSWDRDTVIRALQAAYNNPERA
VEYLYSGIPEQAEVAPVAQPPAGAQPVVTSIYDTQPAVPSGGPNANPLDLFPQGLPTMGS
NAGAGSLDFLRNSQQFQALRAVVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLQLIN
EPVEEGEGNILGQLADAMPQAVTVTPEEGEAIARLEAMGFDRALVVDVFFACNKNEELAA
NYLLDHMHEFDD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaaactcaaggtaaactcagtaggcgtctatgatcaagcggcatccaatctt
gtagctgtaactaacttggacggtactgttcagcagatactagatatgggtggaggaagc
tgggaccgagatactgttatccgtgcactacaggctgcatataataatccagagcgagct
gttgaatacctctattctggtattccagagcaagcagaagttgctcctgttgcgcaacct
cctgctggtgcccagcctgtggtcacttcaatttatgatacacagccagctgtaccttcc
ggtggaccaaatgctaatcctttagatcttttcccacagggtctcccaactatgggctca
aatgcaggtgctggaagcttggattttcttcgcaatagtcaacagttccaagccctgcga
gctgtcgtgcaagccaatcctcaaatcttgcagcctatgcttcaagagcttggaaagcaa
aaccctcagctggttcggctgattcaggaacatcaggctgacttcctacagctaataaat
gaacctgttgaggagggggaagggaacatattagggcaacttgctgatgcaatgccacag
gctgtaactgttacaccagaagagggtgaagcaattgcacgtctcgaggcaatgggtttc
gatcgtgcgttggtagtggatgtattctttgcctgcaacaaaaatgaggagcttgcggcc
aactacctattagaccacatgcacgagtttgatgactga
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