Salvia splendens (scarlet sage): 121774336
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Entry
121774336 CDS
T07627
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03410
Base excision repair
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121774336
03410 Base excision repair
121774336
03420 Nucleotide excision repair
121774336
03430 Mismatch repair
121774336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121774336
03036 Chromosome and associated proteins [BR:
sspl03036
]
121774336
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121774336
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121774336
DNA Replication Termination Factors
ELG1-RFC complex
121774336
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121774336
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121774336
Check point factors
HRAD17(Rad24)-RFC complex
121774336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_11
AAA_5
DNA_pol3_delta2
AAA_16
ResIII
AAA_2
AAA_24
AAA_28
Mg_chelatase
AAA_7
nSTAND3
bpMoxR
Motif
Other DBs
NCBI-GeneID:
121774336
NCBI-ProteinID:
XP_042027162
LinkDB
All DBs
Position
17:complement(13848059..13852047)
Genome browser
AA seq
338 aa
AA seq
DB search
MDGDVDLDHVAQMTEGFSGADLQALLSAQLKRCPRPKQVKDVAHQDEVVRVLTNTLETTN
CPHMLFYGPPGTGKTTTDLAIAHQLYGPELYRSRVLELNASDDCGINVVRTKIKNFAAVA
VGSERQGGYPCPPYKIIILDEADSMTEDAQASVLVLRVLMPCDALWRHTLKLQDSSSFVT
TLADRDLGAARLFGSSISSKDLISVSGVIPDGIMQALFTACKSGDFDIADKEVKNVIAEG
YPASQMLNHLFDVVVESDDIPDDQKARMCKKFGEADKCLVDGADEYLQLLDVASNIMRAL
NNRRIPFRKLGACSSVETSTFCPTTYTTMFHPLSNYVV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatgtcgacttggatcacgtagctcaaatgactgaaggcttcagtggagct
gaccttcaagcgcttctctcagcacaactaaaaagatgccctcgaccgaagcaagtgaag
gatgttgcgcaccaagatgaggtcgttcgagttcttaccaacactttggaaaccactaat
tgtccgcacatgctattctatggtcctcctggtacggggaaaacgaccacagatctcgcc
attgctcaccagctttatgggcccgagttatacaggtctagagtactggagctgaatgct
agtgatgattgtgggataaacgttgttcgtacgaaaattaagaattttgctgctgttgct
gttggctctgaacgtcaaggtggttatccttgcccaccttacaagatcataattcttgat
gaggctgactcgatgactgaagatgcccaggcaagtgtgctggttctgcgtgtattaatg
ccttgcgacgcactatggaggcatactctaaagttacaagattcttcttcatttgtaact
acattagcagatagagatttgggtgctgctcgcttattcggatcctcaatttcatctaag
gacttaatcagcgtgtctggtgtcatccccgatggtattatgcaggctctctttacagct
tgcaaaagtggtgatttcgacatagctgataaagaagtaaaaaatgtgattgctgaaggt
tatccagcttctcagatgctcaatcatttgtttgatgtagttgtcgaatcagacgatata
ccagatgaccagaaagcaagaatgtgcaagaaatttggagaggcagataagtgtcttgta
gacggagcagacgagtatttgcaactgttggatgtggccagcaatatcatgcgtgcgtta
aataacaggagaattccctttcggaagctaggcgcctgctcctccgttgagacgtcaact
ttttgcccaactacatacaccacaatgtttcacccgttgtcaaactacgtcgtttag
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integrated database retrieval system
